Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC103881.1-201ENST00000603476 538 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 AC012557.1-201ENST00000607115 611 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 AC004067.1-201ENST00000608733 700 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 U4.5-201ENST00000617137 123 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 PART1_3.1-201ENST00000619680 131 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 AC104985.2-201ENST00000620598 500 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDH1Q08174 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC116618.1-201ENST00000634617 774 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDH1Q08174 AC087565.3-203ENST00000641018 837 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 CASC19-232ENST00000641480 1244 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDH1Q08174 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 AP003175.1-201ENST00000641383 6658 ntBASIC7.06□□□□□ -1.28
PCDH1Q08174 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
PCDH1Q08174 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
PCDH1Q08174 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.06□□□□□ -1.28
PCDH1Q08174 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PCDH1Q08174 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC090643.1-201ENST00000623600 3100 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC006116.1-201ENST00000587908 2171 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH1Q08174 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDH1Q08174 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 Y_RNA.303-201ENST00000364998 94 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 RNU6-761P-201ENST00000384148 107 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 RNY3P10-201ENST00000384764 102 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC007435.1-201ENST00000421086 415 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC066692.1-201ENST00000421721 457 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC004448.2-201ENST00000422360 586 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC006065.1-201ENST00000422539 802 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 EEF1GP7-201ENST00000422983 703 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 OR6K4P-201ENST00000423179 955 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 OR5W1P-201ENST00000423705 938 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 ISCA1P1-201ENST00000426679 387 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH1Q08174 ELOCP10-201ENST00000440624 327 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 RPL5P10-201ENST00000445207 894 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDH1Q08174 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC117395.2-201ENST00000463122 1128 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 RPL31P58-201ENST00000469001 379 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 FCF1P3-201ENST00000496394 590 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.05□□□□□ -1.28
PCDH1Q08174 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC112225.1-201ENST00000508230 297 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 ST13P12-201ENST00000508958 1094 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC117383.2-201ENST00000514722 322 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC120036.3-201ENST00000517826 292 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 KCTD9P4-201ENST00000526766 1166 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 OR5AK3P-201ENST00000527486 1297 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AP004247.1-201ENST00000531556 1289 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH1Q08174 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC009729.1-201ENST00000548873 1133 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDH1Q08174 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.05□□□□□ -1.28
PCDH1Q08174 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH1Q08174 EIF1P6-201ENST00000600054 334 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC068802.1-201ENST00000603420 732 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC108451.2-201ENST00000603875 538 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 ELOCP34-201ENST00000604436 327 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 NDUFB9P1-201ENST00000604683 510 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AL355333.1-201ENST00000605632 279 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC010857.1-201ENST00000606398 594 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AL136981.2-201ENST00000617319 734 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 AC048341.3-201ENST00000619323 491 ntBASIC7.05□□□□□ -1.28
PCDH1Q08174 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH1Q08174 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH1Q08174 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH1Q08174 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms