Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SSBP1Q04837 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSBP1Q04837 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 AC073136.1-201ENST00000449426 2884 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 TCP1P3-201ENST00000414406 1498 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AC137056.2-201ENST00000624055 1958 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SSBP1Q04837 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 AC007618.1-201ENST00000366455 732 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 PPIAP9-201ENST00000403866 498 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP1Q04837 NIFKP3-201ENST00000417799 865 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AC017019.1-201ENST00000426129 261 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP1Q04837 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP1Q04837 RPL19P16-201ENST00000433839 588 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AC234771.4-201ENST00000441416 730 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AL354872.1-201ENST00000456361 967 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AP003385.3-201ENST00000472498 287 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 RN7SL570P-201ENST00000484405 292 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP1Q04837 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP1Q04837 GAPDHP71-201ENST00000511530 1003 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP1Q04837 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP1Q04837 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP1Q04837 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP1Q04837 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP1Q04837 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.77□□□□□ -1.65
SSBP1Q04837 MIR4260-201ENST00000583107 67 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.77□□□□□ -1.65
SSBP1Q04837 PRPF19P1-201ENST00000584766 898 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 MIR8082-201ENST00000612488 81 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AL080312.2-201ENST00000613001 630 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AC090607.5-201ENST00000615692 224 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 AC018558.4-201ENST00000622153 281 ntBASIC4.77□□□□□ -1.65
SSBP1Q04837 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP1Q04837 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP1Q04837 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SSBP1Q04837 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP1Q04837 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SSBP1Q04837 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.77□□□□□ -1.65
SSBP1Q04837 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SSBP1Q04837 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.77□□□□□ -1.65
SSBP1Q04837 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP1Q04837 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.76□□□□□ -1.65
SSBP1Q04837 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.76□□□□□ -1.65
SSBP1Q04837 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP1Q04837 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SSBP1Q04837 AP005432.1-201ENST00000580891 3485 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP1Q04837 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.76□□□□□ -1.65
SSBP1Q04837 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP1Q04837 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.76□□□□□ -1.65
SSBP1Q04837 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP1Q04837 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
SSBP1Q04837 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SSBP1Q04837 NPM1P40-201ENST00000412758 733 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.76□□□□□ -1.65
SSBP1Q04837 AL138479.1-201ENST00000426913 484 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.76□□□□□ -1.65
SSBP1Q04837 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.76□□□□□ -1.65
SSBP1Q04837 CYCSP24-201ENST00000445119 316 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.76□□□□□ -1.65
SSBP1Q04837 AC073909.1-201ENST00000447112 999 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 AL358876.1-201ENST00000453364 1075 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP1Q04837 RPL12P30-201ENST00000488389 499 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SSBP1Q04837 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSBP1Q04837 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.76□□□□□ -1.65
SSBP1Q04837 AC008868.1-201ENST00000509786 737 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.76□□□□□ -1.65
SSBP1Q04837 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.76□□□□□ -1.65
SSBP1Q04837 AC027369.5-201ENST00000533838 755 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.76□□□□□ -1.65
SSBP1Q04837 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.76□□□□□ -1.65
SSBP1Q04837 AC103968.1-201ENST00000557841 573 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.76□□□□□ -1.65
SSBP1Q04837 MIR3157-201ENST00000578688 85 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 MIR4311-201ENST00000580794 100 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 MIR4472-2-201ENST00000582069 67 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 MIR3936-201ENST00000584304 110 ntBASIC4.76□□□□□ -1.65
SSBP1Q04837 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms