Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
H3F3AP84243 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
H3F3AP84243 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.21□□□□□ -1.57
H3F3AP84243 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
H3F3AP84243 AC120036.2-201ENST00000509729 1474 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
H3F3AP84243 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
H3F3AP84243 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
H3F3AP84243 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 AL354868.1-201ENST00000417077 482 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 RPL6P21-201ENST00000418672 846 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 AC019205.1-201ENST00000421830 730 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.21□□□□□ -1.58
H3F3AP84243 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3AP84243 PCBP2P1-201ENST00000437262 977 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3AP84243 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3AP84243 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3AP84243 RSU1P1-201ENST00000453416 441 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 FRG2FP-204ENST00000453982 852 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 AC004129.2-201ENST00000457229 287 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3AP84243 AC006539.1-201ENST00000481419 501 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3AP84243 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3AP84243 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.21□□□□□ -1.58
H3F3AP84243 AC126615.2-201ENST00000553003 515 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3AP84243 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3AP84243 AC005726.4-201ENST00000582858 458 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.21□□□□□ -1.58
H3F3AP84243 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 AC022919.1-201ENST00000624979 626 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.21□□□□□ -1.58
H3F3AP84243 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.21□□□□□ -1.58
H3F3AP84243 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
H3F3AP84243 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
H3F3AP84243 AC117409.1-201ENST00000470499 1310 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 AC092070.2-203ENST00000598377 3644 ntBASIC5.21□□□□□ -1.58
H3F3AP84243 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
H3F3AP84243 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.21□□□□□ -1.58
H3F3AP84243 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3AP84243 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 MFSD8-239ENST00000641590 2479 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
H3F3AP84243 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H3F3AP84243 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
H3F3AP84243 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
H3F3AP84243 OR56A4-201ENST00000330728 1209 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 RN7SKP279-201ENST00000411383 298 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 MRPL53P1-201ENST00000414323 319 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3AP84243 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.2□□□□□ -1.58
H3F3AP84243 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3AP84243 AC092651.1-201ENST00000426110 312 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 VTI1BP4-201ENST00000427516 527 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3AP84243 AL512637.1-201ENST00000439523 1231 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 RPL5P10-201ENST00000445207 894 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3AP84243 AC093166.4-201ENST00000457867 318 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 RNU1-88P-201ENST00000459274 128 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 NDUFA5P5-201ENST00000468361 342 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.2□□□□□ -1.58
H3F3AP84243 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.2□□□□□ -1.58
H3F3AP84243 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3AP84243 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
H3F3AP84243 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.2□□□□□ -1.58
H3F3AP84243 NPM1P42-201ENST00000560329 862 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.2□□□□□ -1.58
H3F3AP84243 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
H3F3AP84243 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.2□□□□□ -1.58
H3F3AP84243 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.2□□□□□ -1.58
H3F3AP84243 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3AP84243 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3AP84243 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.2□□□□□ -1.58
H3F3AP84243 RPL12P48-201ENST00000605620 304 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 AL365181.4-201ENST00000609800 547 ntBASIC5.2□□□□□ -1.58
H3F3AP84243 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
H3F3AP84243 RNA5SP439-201ENST00000617595 124 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms