Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.61□□□□□ -1.35
YBX1P67809 AL031985.2-201ENST00000600955 480 ntBASIC6.61□□□□□ -1.35
YBX1P67809 QTRT1P1-201ENST00000604344 1078 ntBASIC6.61□□□□□ -1.35
YBX1P67809 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.61□□□□□ -1.35
YBX1P67809 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.61□□□□□ -1.35
YBX1P67809 U6atac.1-201ENST00000616025 117 ntBASIC6.61□□□□□ -1.35
YBX1P67809 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
YBX1P67809 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.61□□□□□ -1.35
YBX1P67809 AC010975.3-201ENST00000618727 978 ntBASIC6.61□□□□□ -1.35
YBX1P67809 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.61□□□□□ -1.35
YBX1P67809 MIR6813-201ENST00000621638 56 ntBASIC6.61□□□□□ -1.35
YBX1P67809 AC079248.2-201ENST00000623779 326 ntBASIC6.61□□□□□ -1.35
YBX1P67809 SNORA16A-202ENST00000628458 135 ntBASIC6.61□□□□□ -1.35
YBX1P67809 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.61□□□□□ -1.35
YBX1P67809 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
YBX1P67809 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
YBX1P67809 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.61□□□□□ -1.35
YBX1P67809 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
YBX1P67809 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
YBX1P67809 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.61□□□□□ -1.35
YBX1P67809 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.6□□□□□ -1.35
YBX1P67809 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.6□□□□□ -1.35
YBX1P67809 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.6□□□□□ -1.35
YBX1P67809 FO082842.1-201ENST00000423552 1370 ntBASIC6.6□□□□□ -1.35
YBX1P67809 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
YBX1P67809 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 RNU5E-4P-201ENST00000364931 120 ntBASIC6.6□□□□□ -1.35
YBX1P67809 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
YBX1P67809 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
YBX1P67809 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 AC008173.1-201ENST00000418901 264 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.6□□□□□ -1.35
YBX1P67809 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.6□□□□□ -1.35
YBX1P67809 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.6□□□□□ -1.35
YBX1P67809 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.6□□□□□ -1.35
YBX1P67809 AC245517.2-201ENST00000442890 346 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.6□□□□□ -1.35
YBX1P67809 AL845321.1-201ENST00000444603 348 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 AL354714.5-201ENST00000450131 590 ntBASIC6.6□□□□□ -1.35
YBX1P67809 Z95152.1-201ENST00000453556 656 ntBASIC6.6□□□□□ -1.35
YBX1P67809 MRPL35P4-201ENST00000453682 566 ntBASIC6.6□□□□□ -1.35
YBX1P67809 RN7SL390P-201ENST00000470634 284 ntBASIC6.6□□□□□ -1.35
YBX1P67809 RPL7P16-201ENST00000479738 738 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AC026826.1-201ENST00000493002 361 ntBASIC6.6□□□□□ -1.35
YBX1P67809 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.6□□□□□ -1.35
YBX1P67809 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 RNU2-30P-201ENST00000516209 141 ntBASIC6.6□□□□□ -1.35
YBX1P67809 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.6□□□□□ -1.35
YBX1P67809 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.6□□□□□ -1.35
YBX1P67809 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.6□□□□□ -1.35
YBX1P67809 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.6□□□□□ -1.35
YBX1P67809 AC007346.1-201ENST00000569208 867 ntBASIC6.6□□□□□ -1.35
YBX1P67809 MTND4LP24-201ENST00000572277 291 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 MIR378C-201ENST00000578683 81 ntBASIC6.6□□□□□ -1.35
YBX1P67809 MIR4312-201ENST00000579909 76 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AC008759.1-201ENST00000589783 983 ntBASIC6.6□□□□□ -1.35
YBX1P67809 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 AC004908.1-201ENST00000606572 541 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AL450489.1-201ENST00000612071 468 ntBASIC6.6□□□□□ -1.35
YBX1P67809 VN1R74P-201ENST00000613259 503 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AL590240.3-201ENST00000621416 943 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AC091932.2-201ENST00000623014 291 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AC005858.3-201ENST00000624756 589 ntBASIC6.6□□□□□ -1.35
YBX1P67809 AL008636.1-201ENST00000625038 1018 ntBASIC6.6□□□□□ -1.35
YBX1P67809 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
YBX1P67809 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
YBX1P67809 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
YBX1P67809 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
YBX1P67809 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
YBX1P67809 AC005618.1-201ENST00000606901 3148 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms