Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC084036.1-201ENST00000609190 508 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN20P56880 AL137067.2-201ENST00000621202 131 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AL356490.1-201ENST00000623079 479 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AC009120.7-201ENST00000623452 780 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 AC119674.1-220ENST00000641502 1048 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN20P56880 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN20P56880 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CLDN20P56880 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN20P56880 HDAC1P2-201ENST00000453661 1398 ntBASIC5.55□□□□□ -1.52
CLDN20P56880 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN20P56880 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CLDN20P56880 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN20P56880 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN20P56880 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN20P56880 AC109446.4-201ENST00000623235 2755 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN20P56880 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN20P56880 RNU1-134P-201ENST00000362935 165 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 RN7SKP186-201ENST00000365371 303 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 AL132875.1-201ENST00000403623 949 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 SNORA77.2-201ENST00000408571 112 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN20P56880 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN20P56880 AC130360.1-201ENST00000425489 1117 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 AC016027.5-201ENST00000427227 210 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 AC069154.1-201ENST00000432914 542 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN20P56880 AC110602.1-201ENST00000437414 318 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN20P56880 AC009963.3-201ENST00000458090 486 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN20P56880 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN20P56880 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.54□□□□□ -1.52
CLDN20P56880 AC016687.1-201ENST00000482574 353 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 AL158068.1-201ENST00000506116 616 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN20P56880 CR383658.1-201ENST00000514609 734 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 RNA5SP434-201ENST00000516647 121 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 RN7SKP70-201ENST00000516655 271 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 IGKV3D-25-201ENST00000519599 235 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN20P56880 AC130365.2-201ENST00000525882 1201 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 AC005000.1-201ENST00000536192 288 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 RNU4ATAC-201ENST00000580972 127 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN20P56880 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN20P56880 AL021368.3-201ENST00000607119 578 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 AP001437.1-201ENST00000608783 456 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN20P56880 AC004801.6-201ENST00000616571 978 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN20P56880 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN20P56880 AL359955.1-201ENST00000455242 3275 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN20P56880 AC022325.1-201ENST00000502748 2199 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 HSPD1P9-201ENST00000420325 1636 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CLDN20P56880 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CLDN20P56880 AL161912.4-201ENST00000623889 2468 ntBASIC5.54□□□□□ -1.52
CLDN20P56880 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN20P56880 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN20P56880 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.53□□□□□ -1.52
CLDN20P56880 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLDN20P56880 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 AC096921.2-201ENST00000561507 1916 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLDN20P56880 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 COX6B1P3-201ENST00000312310 260 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 RNA5SP453-201ENST00000362503 119 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 Y_RNA.110-201ENST00000363220 99 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 RNU6-1331P-201ENST00000363658 106 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 RNA5SP433-201ENST00000364491 114 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 MIR130B-202ENST00000385018 82 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.53□□□□□ -1.52
CLDN20P56880 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC115283.1-201ENST00000427353 400 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 KRT8P51-201ENST00000438938 274 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.53□□□□□ -1.52
CLDN20P56880 PCNPP2-201ENST00000441651 455 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 RPL6P30-201ENST00000443382 862 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLDN20P56880 AC097463.1-201ENST00000447288 481 ntBASIC5.53□□□□□ -1.52
CLDN20P56880 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms