Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.33□□□□□ -1.4
GFRA1P56159 OR56B2P-201ENST00000317102 954 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 IL6STP1-201ENST00000346911 1020 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 Y_RNA.560-201ENST00000384689 102 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 MIR187-201ENST00000385062 109 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.33□□□□□ -1.4
GFRA1P56159 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.33□□□□□ -1.4
GFRA1P56159 LINC01881-201ENST00000416103 412 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC007435.1-201ENST00000421086 415 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 ATP5F1P1-201ENST00000433775 569 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 RPL7P29-201ENST00000437151 728 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AL845321.1-201ENST00000444603 348 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.33□□□□□ -1.4
GFRA1P56159 AL354714.5-201ENST00000450131 590 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC022730.1-201ENST00000473114 568 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AC037198.2-201ENST00000478845 733 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 RPL7P18-201ENST00000478965 734 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AC090114.3-201ENST00000479267 829 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC093325.1-201ENST00000508378 326 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC008837.2-201ENST00000513076 418 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 IGLVV-66-201ENST00000523818 341 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC092747.2-201ENST00000545069 983 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.33□□□□□ -1.4
GFRA1P56159 AC069240.2-201ENST00000550242 609 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 AL109628.1-201ENST00000556877 366 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.33□□□□□ -1.4
GFRA1P56159 MIR744-201ENST00000578242 98 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AC069545.1-201ENST00000605671 358 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AL139286.2-201ENST00000606838 396 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AC004492.1-201ENST00000607036 742 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AL451074.6-201ENST00000608512 729 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AP000254.1-201ENST00000609934 520 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AC007786.3-201ENST00000615154 596 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 AC140479.4-205ENST00000636339 820 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 CASC19-232ENST00000641480 1244 ntBASIC6.33□□□□□ -1.4
GFRA1P56159 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.33□□□□□ -1.4
GFRA1P56159 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
GFRA1P56159 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
GFRA1P56159 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
GFRA1P56159 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.33□□□□□ -1.4
GFRA1P56159 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GFRA1P56159 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.33□□□□□ -1.4
GFRA1P56159 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.33□□□□□ -1.4
GFRA1P56159 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.32□□□□□ -1.4
GFRA1P56159 CDY19P-201ENST00000411668 1613 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 CDY18P-201ENST00000438294 1609 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 OR4C1P-202ENST00000641065 1569 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 AL512353.3-201ENST00000417517 1326 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
GFRA1P56159 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 AC102941.1-201ENST00000567616 1537 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
GFRA1P56159 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GFRA1P56159 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.32□□□□□ -1.4
GFRA1P56159 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
GFRA1P56159 RNU6-1339P-201ENST00000363574 91 ntBASIC6.32□□□□□ -1.4
GFRA1P56159 RNA5SP172-201ENST00000365061 118 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms