Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC241377.1-201ENST00000619797 406 ntBASIC6□□□□□ -1.45
CDH6P55285 AL353684.1-201ENST00000622677 1120 ntBASIC6□□□□□ -1.45
CDH6P55285 AC018628.1-201ENST00000624147 3819 ntBASIC6□□□□□ -1.45
CDH6P55285 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6□□□□□ -1.45
CDH6P55285 OR8A1-204ENST00000642111 1145 ntBASIC6□□□□□ -1.45
CDH6P55285 MSL3P1-202ENST00000440028 1468 ntBASIC6□□□□□ -1.45
CDH6P55285 AC120036.2-201ENST00000509729 1474 ntBASIC6□□□□□ -1.45
CDH6P55285 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6□□□□□ -1.45
CDH6P55285 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CDH6P55285 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
CDH6P55285 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
CDH6P55285 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH6P55285 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH6P55285 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
CDH6P55285 AC093297.3-201ENST00000607056 2517 ntBASIC5.99□□□□□ -1.45
CDH6P55285 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH6P55285 BCORP1-203ENST00000513194 5093 ntBASIC5.99□□□□□ -1.45
CDH6P55285 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH6P55285 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
CDH6P55285 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH6P55285 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
CDH6P55285 RNA5SP477-201ENST00000362639 119 ntBASIC5.99□□□□□ -1.45
CDH6P55285 AL357752.1-201ENST00000412817 349 ntBASIC5.99□□□□□ -1.45
CDH6P55285 MRPL53P1-201ENST00000414323 319 ntBASIC5.99□□□□□ -1.45
CDH6P55285 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH6P55285 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.99□□□□□ -1.45
CDH6P55285 GAPDHP48-201ENST00000436626 961 ntBASIC5.99□□□□□ -1.45
CDH6P55285 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH6P55285 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH6P55285 AL359839.1-201ENST00000451975 1160 ntBASIC5.99□□□□□ -1.45
CDH6P55285 MEMO1P4-201ENST00000453590 386 ntBASIC5.99□□□□□ -1.45
CDH6P55285 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH6P55285 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH6P55285 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH6P55285 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH6P55285 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH6P55285 BCAS2P1-201ENST00000528022 632 ntBASIC5.99□□□□□ -1.45
CDH6P55285 AP000619.2-201ENST00000546014 969 ntBASIC5.99□□□□□ -1.45
CDH6P55285 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH6P55285 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH6P55285 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH6P55285 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CDH6P55285 AC134669.1-201ENST00000581275 672 ntBASIC5.99□□□□□ -1.45
CDH6P55285 MIR4420-201ENST00000583944 77 ntBASIC5.99□□□□□ -1.45
CDH6P55285 AL499605.1-201ENST00000604628 403 ntBASIC5.99□□□□□ -1.45
CDH6P55285 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.99□□□□□ -1.45
CDH6P55285 MIR6071-201ENST00000616741 78 ntBASIC5.99□□□□□ -1.45
CDH6P55285 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH6P55285 AC015799.1-201ENST00000622996 3122 ntBASIC5.99□□□□□ -1.45
CDH6P55285 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH6P55285 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH6P55285 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CDH6P55285 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH6P55285 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.99□□□□□ -1.45
CDH6P55285 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH6P55285 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 AC004656.1-201ENST00000568479 4951 ntBASIC5.98□□□□□ -1.45
CDH6P55285 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
CDH6P55285 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
CDH6P55285 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH6P55285 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH6P55285 OR5W1P-201ENST00000423705 938 ntBASIC5.98□□□□□ -1.45
CDH6P55285 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH6P55285 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH6P55285 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH6P55285 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH6P55285 CR383656.1-201ENST00000484916 377 ntBASIC5.98□□□□□ -1.45
CDH6P55285 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH6P55285 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH6P55285 AC139365.2-201ENST00000517972 253 ntBASIC5.98□□□□□ -1.45
CDH6P55285 AC060775.1-201ENST00000518241 520 ntBASIC5.98□□□□□ -1.45
CDH6P55285 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH6P55285 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH6P55285 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH6P55285 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH6P55285 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH6P55285 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH6P55285 AC092070.2-203ENST00000598377 3644 ntBASIC5.98□□□□□ -1.45
CDH6P55285 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 AC083837.1-201ENST00000565297 2994 ntBASIC5.98□□□□□ -1.45
CDH6P55285 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH6P55285 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.98□□□□□ -1.45
CDH6P55285 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.98□□□□□ -1.45
CDH6P55285 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH6P55285 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH6P55285 OR7E156P-201ENST00000400303 464 ntBASIC5.97□□□□□ -1.45
CDH6P55285 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH6P55285 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH6P55285 RNGTTP1-201ENST00000420965 728 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms