Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MMP13P45452 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MMP13P45452 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MMP13P45452 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.21□□□□□ -1.42
MMP13P45452 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
MMP13P45452 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 MIR133A2-201ENST00000347538 102 ntBASIC6.2□□□□□ -1.42
MMP13P45452 RNU105B-201ENST00000364478 208 ntBASIC6.2□□□□□ -1.42
MMP13P45452 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 DHFRP5-201ENST00000406944 564 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP13P45452 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP13P45452 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 RPS15AP30-201ENST00000420976 390 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 RPL12P12-201ENST00000424633 501 ntBASIC6.2□□□□□ -1.42
MMP13P45452 MRPS21P2-201ENST00000424704 264 ntBASIC6.2□□□□□ -1.42
MMP13P45452 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.2□□□□□ -1.42
MMP13P45452 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 RPL17P35-201ENST00000432217 549 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AC023141.3-201ENST00000436698 278 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP13P45452 RPSAP40-201ENST00000442343 891 ntBASIC6.2□□□□□ -1.42
MMP13P45452 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 ZNF619P1-201ENST00000446539 752 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.2□□□□□ -1.42
MMP13P45452 RPL23AP40-201ENST00000487630 390 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.2□□□□□ -1.42
MMP13P45452 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP13P45452 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.2□□□□□ -1.42
MMP13P45452 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.2□□□□□ -1.42
MMP13P45452 DPPA3P2-202ENST00000557188 1219 ntBASIC6.2□□□□□ -1.42
MMP13P45452 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MMP13P45452 AC060780.2-201ENST00000589047 198 ntBASIC6.2□□□□□ -1.42
MMP13P45452 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 AC245884.10-201ENST00000597355 337 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 BNIP3P27-201ENST00000599991 412 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AL391834.2-201ENST00000609982 546 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AL512506.1-201ENST00000613918 449 ntBASIC6.2□□□□□ -1.42
MMP13P45452 AL591926.1-201ENST00000620542 217 ntBASIC6.2□□□□□ -1.42
MMP13P45452 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 AC008993.2-201ENST00000631744 806 ntBASIC6.2□□□□□ -1.42
MMP13P45452 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
MMP13P45452 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.2□□□□□ -1.42
MMP13P45452 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
MMP13P45452 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.2□□□□□ -1.42
MMP13P45452 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.19□□□□□ -1.42
MMP13P45452 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.19□□□□□ -1.42
MMP13P45452 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MMP13P45452 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MMP13P45452 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.19□□□□□ -1.42
MMP13P45452 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP13P45452 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.19□□□□□ -1.42
MMP13P45452 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MMP13P45452 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MMP13P45452 ADAM24P-201ENST00000398655 2101 ntBASIC6.19□□□□□ -1.42
MMP13P45452 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MMP13P45452 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP13P45452 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MMP13P45452 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
MMP13P45452 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MMP13P45452 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP13P45452 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP13P45452 RNU1-65P-201ENST00000363919 148 ntBASIC6.19□□□□□ -1.42
MMP13P45452 RN7SKP128-201ENST00000364270 303 ntBASIC6.19□□□□□ -1.42
MMP13P45452 AL355143.1-201ENST00000407101 841 ntBASIC6.19□□□□□ -1.42
MMP13P45452 GABARAPL3-201ENST00000412799 354 ntBASIC6.19□□□□□ -1.42
MMP13P45452 AC245096.1-201ENST00000413104 546 ntBASIC6.19□□□□□ -1.42
MMP13P45452 AL158827.1-201ENST00000416300 391 ntBASIC6.19□□□□□ -1.42
MMP13P45452 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.19□□□□□ -1.42
MMP13P45452 XKRYP6-201ENST00000440468 1116 ntBASIC6.19□□□□□ -1.42
MMP13P45452 XKRYP3-201ENST00000442113 1116 ntBASIC6.19□□□□□ -1.42
MMP13P45452 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.19□□□□□ -1.42
MMP13P45452 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.19□□□□□ -1.42
MMP13P45452 AC106806.2-201ENST00000509365 500 ntBASIC6.19□□□□□ -1.42
MMP13P45452 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.19□□□□□ -1.42
MMP13P45452 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.19□□□□□ -1.42
MMP13P45452 AC084121.1-201ENST00000533882 835 ntBASIC6.19□□□□□ -1.42
MMP13P45452 OR8X1P-201ENST00000534542 869 ntBASIC6.19□□□□□ -1.42
MMP13P45452 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MMP13P45452 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.19□□□□□ -1.42
MMP13P45452 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.19□□□□□ -1.42
MMP13P45452 AC138473.1-201ENST00000605717 526 ntBASIC6.19□□□□□ -1.42
MMP13P45452 AL645933.2-201ENST00000606743 1207 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms