Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNA5SP455-201ENST00000365190 119 ntBASIC6.01□□□□□ -1.45
HTTP42858 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.01□□□□□ -1.45
HTTP42858 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 BZW1P1-201ENST00000454901 1240 ntBASIC6.01□□□□□ -1.45
HTTP42858 AC063943.1-201ENST00000465434 453 ntBASIC6.01□□□□□ -1.45
HTTP42858 AC140172.1-201ENST00000502928 141 ntBASIC6.01□□□□□ -1.45
HTTP42858 AC093720.1-201ENST00000505681 714 ntBASIC6.01□□□□□ -1.45
HTTP42858 AC069366.1-201ENST00000583159 838 ntBASIC6.01□□□□□ -1.45
HTTP42858 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 NANOGP3-201ENST00000605855 286 ntBASIC6.01□□□□□ -1.45
HTTP42858 MIR92B-201ENST00000607575 96 ntBASIC6.01□□□□□ -1.45
HTTP42858 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 ZAN-205ENST00000613979 8669 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HTTP42858 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HTTP42858 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.01□□□□□ -1.45
HTTP42858 RNA5SP326-201ENST00000363209 110 ntBASIC6.01□□□□□ -1.45
HTTP42858 SNORA37-201ENST00000384504 129 ntBASIC6.01□□□□□ -1.45
HTTP42858 CHEK2P3-201ENST00000416118 248 ntBASIC6.01□□□□□ -1.45
HTTP42858 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.01□□□□□ -1.45
HTTP42858 DNAJC19P7-201ENST00000428811 344 ntBASIC6.01□□□□□ -1.45
HTTP42858 IGKV1-32-201ENST00000519290 311 ntBASIC6.01□□□□□ -1.45
HTTP42858 AP005403.1-201ENST00000579720 229 ntBASIC6.01□□□□□ -1.45
HTTP42858 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HTTP42858 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.01□□□□□ -1.45
HTTP42858 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HTTP42858 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.01□□□□□ -1.45
HTTP42858 AC105046.1-201ENST00000566457 4997 ntBASIC6.01□□□□□ -1.45
HTTP42858 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6□□□□□ -1.45
HTTP42858 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
HTTP42858 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
HTTP42858 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6□□□□□ -1.45
HTTP42858 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6□□□□□ -1.45
HTTP42858 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HTTP42858 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6□□□□□ -1.45
HTTP42858 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6□□□□□ -1.45
HTTP42858 AC104118.1-201ENST00000607625 1589 ntBASIC6□□□□□ -1.45
HTTP42858 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HTTP42858 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC6□□□□□ -1.45
HTTP42858 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6□□□□□ -1.45
HTTP42858 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6□□□□□ -1.45
HTTP42858 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6□□□□□ -1.45
HTTP42858 COX6B1P5-201ENST00000509843 249 ntBASIC6□□□□□ -1.45
HTTP42858 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6□□□□□ -1.45
HTTP42858 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6□□□□□ -1.45
HTTP42858 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HTTP42858 MIR4715-201ENST00000584117 79 ntBASIC6□□□□□ -1.45
HTTP42858 AC125494.2-201ENST00000602431 657 ntBASIC6□□□□□ -1.45
HTTP42858 AC099654.6-201ENST00000636487 512 ntBASIC6□□□□□ -1.45
HTTP42858 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6□□□□□ -1.45
HTTP42858 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6□□□□□ -1.45
HTTP42858 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6□□□□□ -1.45
HTTP42858 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 BX284613.1-201ENST00000452221 1641 ntBASIC6□□□□□ -1.45
HTTP42858 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HTTP42858 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HTTP42858 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HTTP42858 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.99□□□□□ -1.45
HTTP42858 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.99□□□□□ -1.45
HTTP42858 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.99□□□□□ -1.45
HTTP42858 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HTTP42858 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.99□□□□□ -1.45
HTTP42858 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HTTP42858 SNORA11C-201ENST00000408532 129 ntBASIC5.99□□□□□ -1.45
HTTP42858 AC009480.2-201ENST00000422916 432 ntBASIC5.99□□□□□ -1.45
HTTP42858 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.99□□□□□ -1.45
HTTP42858 AC022034.3-201ENST00000471393 478 ntBASIC5.99□□□□□ -1.45
HTTP42858 GTF2F2P1-201ENST00000511083 675 ntBASIC5.99□□□□□ -1.45
HTTP42858 TOMM22P4-201ENST00000511318 336 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms