Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 TRY2P-201ENST00000448860 689 ntBASIC7.29□□□□□ -1.24
COL18A1P39060 AC092647.2-201ENST00000452998 253 ntBASIC7.29□□□□□ -1.24
COL18A1P39060 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC7.29□□□□□ -1.24
COL18A1P39060 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.29□□□□□ -1.24
COL18A1P39060 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.29□□□□□ -1.24
COL18A1P39060 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.29□□□□□ -1.24
COL18A1P39060 OR51A1P-201ENST00000511110 946 ntBASIC7.29□□□□□ -1.24
COL18A1P39060 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL18A1P39060 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.29□□□□□ -1.24
COL18A1P39060 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.29□□□□□ -1.24
COL18A1P39060 AC018552.1-201ENST00000562099 811 ntBASIC7.29□□□□□ -1.24
COL18A1P39060 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.29□□□□□ -1.24
COL18A1P39060 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
COL18A1P39060 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL18A1P39060 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
COL18A1P39060 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
COL18A1P39060 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL18A1P39060 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL18A1P39060 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL18A1P39060 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL18A1P39060 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.29□□□□□ -1.24
COL18A1P39060 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
COL18A1P39060 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 SNURFL-201ENST00000309296 343 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 AL121886.1-201ENST00000358609 435 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 RNU4-2-201ENST00000365668 141 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 MIR141-201ENST00000384975 95 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 RNA5SP251-201ENST00000410614 137 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 AL596266.1-201ENST00000448132 400 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC7.28□□□□□ -1.24
COL18A1P39060 AC007686.1-201ENST00000488511 463 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.28□□□□□ -1.24
COL18A1P39060 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.28□□□□□ -1.24
COL18A1P39060 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC7.28□□□□□ -1.24
COL18A1P39060 AP005403.1-201ENST00000579720 229 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.28□□□□□ -1.24
COL18A1P39060 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
COL18A1P39060 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
COL18A1P39060 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.28□□□□□ -1.24
COL18A1P39060 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.28□□□□□ -1.24
COL18A1P39060 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
COL18A1P39060 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.28□□□□□ -1.24
COL18A1P39060 AC008171.1-201ENST00000395058 200 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 CYB5AP4-201ENST00000396692 399 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 AC104837.2-201ENST00000427236 424 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 VDAC1P6-201ENST00000430062 855 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 RPL12P39-201ENST00000455456 496 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 OR51K1P-201ENST00000510214 950 ntBASIC7.28□□□□□ -1.24
COL18A1P39060 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.28□□□□□ -1.24
COL18A1P39060 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.28□□□□□ -1.24
COL18A1P39060 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL18A1P39060 MT-RNR2-201ENST00000387347 1559 ntBASIC7.27□□□□□ -1.24
COL18A1P39060 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL18A1P39060 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.27□□□□□ -1.25
COL18A1P39060 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.27□□□□□ -1.25
COL18A1P39060 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.27□□□□□ -1.25
COL18A1P39060 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL18A1P39060 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL18A1P39060 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL18A1P39060 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.27□□□□□ -1.25
COL18A1P39060 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
COL18A1P39060 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL18A1P39060 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL18A1P39060 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL18A1P39060 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
COL18A1P39060 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.27□□□□□ -1.25
COL18A1P39060 DBIP1-201ENST00000401435 260 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 SNORA11-201ENST00000408789 128 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 VN1R21P-201ENST00000426703 765 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 AC011753.3-201ENST00000443436 406 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC7.27□□□□□ -1.25
COL18A1P39060 RPS29P22-201ENST00000472363 168 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 AC096754.1-201ENST00000508904 818 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.27□□□□□ -1.25
COL18A1P39060 AP000769.2-201ENST00000602344 396 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.27□□□□□ -1.25
COL18A1P39060 CASC19-281ENST00000642118 1554 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
COL18A1P39060 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL18A1P39060 ZNF840P-201ENST00000504759 1996 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL18A1P39060 AL589993.1-201ENST00000407450 2524 ntBASIC7.27□□□□□ -1.25
COL18A1P39060 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL18A1P39060 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC7.26□□□□□ -1.25
COL18A1P39060 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7.26□□□□□ -1.25
COL18A1P39060 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC7.26□□□□□ -1.25
COL18A1P39060 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL18A1P39060 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
COL18A1P39060 RN7SKP95-201ENST00000362860 303 ntBASIC7.26□□□□□ -1.25
COL18A1P39060 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL18A1P39060 RN7SKP126-201ENST00000411143 300 ntBASIC7.26□□□□□ -1.25
COL18A1P39060 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms