Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DPA1P20036 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.99□□□□□ -1.45
HLA-DPA1P20036 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DPA1P20036 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DPA1P20036 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DPA1P20036 PSG10P-201ENST00000501199 1500 ntBASIC5.99□□□□□ -1.45
HLA-DPA1P20036 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DPA1P20036 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 SELENOWP1-201ENST00000322792 252 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC016739.1-201ENST00000405359 345 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 RN7SKP240-201ENST00000410583 375 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 RPS4XP5-201ENST00000419038 768 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 LSM3P4-201ENST00000502948 309 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 snoU109.5-201ENST00000516231 132 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AP001804.2-201ENST00000533932 910 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC007956.1-201ENST00000555623 542 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC079315.1-201ENST00000602952 623 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 LSM1P2-201ENST00000604911 322 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AL021918.2-201ENST00000613415 194 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AC007159.1-201ENST00000566529 4706 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AP000547.3-204ENST00000588548 2523 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 SYT14P1-202ENST00000600441 1448 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 IMMTP1-201ENST00000435590 2219 ntBASIC5.98□□□□□ -1.45
HLA-DPA1P20036 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DPA1P20036 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 FUNDC2P3-201ENST00000334716 533 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 Y_RNA.62-201ENST00000362840 99 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 RN7SKP128-201ENST00000364270 303 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AL096711.1-201ENST00000404780 554 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 RAB9AP4-201ENST00000415230 609 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 FTLP19-201ENST00000433300 394 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 TUBB4BP6-201ENST00000437576 479 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 ATP5LP2-201ENST00000440646 311 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 SEPT7P3-201ENST00000455017 621 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 OSTCP1-201ENST00000455507 450 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.97□□□□□ -1.45
HLA-DPA1P20036 AC079080.1-201ENST00000479841 822 ntBASIC5.97□□□□□ -1.45
HLA-DPA1P20036 RPL38P3-201ENST00000484463 213 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms