Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.36□□□□□ -1.39
ATF4P18848 AL593856.1-201ENST00000419949 805 ntBASIC6.36□□□□□ -1.39
ATF4P18848 LINC00993-201ENST00000420453 540 ntBASIC6.36□□□□□ -1.39
ATF4P18848 MTCO2P34-201ENST00000421994 607 ntBASIC6.36□□□□□ -1.39
ATF4P18848 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.36□□□□□ -1.39
ATF4P18848 IPPKP1-201ENST00000422501 768 ntBASIC6.36□□□□□ -1.39
ATF4P18848 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC6.36□□□□□ -1.39
ATF4P18848 AC132217.1-201ENST00000430034 373 ntTSL 3 BASIC6.36□□□□□ -1.39
ATF4P18848 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC6.36□□□□□ -1.39
ATF4P18848 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC6.36□□□□□ -1.39
ATF4P18848 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC6.36□□□□□ -1.39
ATF4P18848 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC6.36□□□□□ -1.39
ATF4P18848 FAR2P3-205ENST00000447059 604 ntBASIC6.36□□□□□ -1.39
ATF4P18848 OR52E3P-201ENST00000452083 936 ntBASIC6.36□□□□□ -1.39
ATF4P18848 ZNF114P1-201ENST00000453500 292 ntBASIC6.36□□□□□ -1.39
ATF4P18848 VN1R6P-201ENST00000458417 907 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC079841.1-201ENST00000481228 950 ntBASIC6.36□□□□□ -1.39
ATF4P18848 RPL12P8-201ENST00000482081 580 ntBASIC6.36□□□□□ -1.39
ATF4P18848 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATF4P18848 AC244505.1-201ENST00000502642 307 ntBASIC6.36□□□□□ -1.39
ATF4P18848 KLRA1P-201ENST00000503499 986 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC022296.2-201ENST00000512424 202 ntBASIC6.36□□□□□ -1.39
ATF4P18848 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC6.36□□□□□ -1.39
ATF4P18848 AL117351.2-201ENST00000513571 157 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC6.36□□□□□ -1.39
ATF4P18848 RN7SKP233-201ENST00000517005 110 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC091982.1-201ENST00000518134 520 ntBASIC6.36□□□□□ -1.39
ATF4P18848 RPL10P19-201ENST00000519013 301 ntBASIC6.36□□□□□ -1.39
ATF4P18848 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.36□□□□□ -1.39
ATF4P18848 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.36□□□□□ -1.39
ATF4P18848 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.36□□□□□ -1.39
ATF4P18848 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATF4P18848 IGLVI-70-201ENST00000523272 390 ntBASIC6.36□□□□□ -1.39
ATF4P18848 SLC5A4P1-201ENST00000532944 612 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC073913.2-201ENST00000541512 145 ntBASIC6.36□□□□□ -1.39
ATF4P18848 EGLN3P1-201ENST00000541727 720 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC055716.1-201ENST00000550077 495 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.36□□□□□ -1.39
ATF4P18848 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.36□□□□□ -1.39
ATF4P18848 MPPE1P1-201ENST00000557286 1076 ntBASIC6.36□□□□□ -1.39
ATF4P18848 TP53TG3HP-201ENST00000563487 346 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC112484.4-201ENST00000567253 811 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.36□□□□□ -1.39
ATF4P18848 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC6.36□□□□□ -1.39
ATF4P18848 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC6.36□□□□□ -1.39
ATF4P18848 CCDC58P1-201ENST00000578567 430 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC008507.1-201ENST00000587506 734 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.36□□□□□ -1.39
ATF4P18848 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC6.36□□□□□ -1.39
ATF4P18848 AL078623.1-201ENST00000602702 907 ntBASIC6.36□□□□□ -1.39
ATF4P18848 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.36□□□□□ -1.39
ATF4P18848 PSMA6P4-201ENST00000603247 718 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AL109936.2-201ENST00000605350 650 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AL031775.1-201ENST00000607014 887 ntBASIC6.36□□□□□ -1.39
ATF4P18848 PRYP3-202ENST00000607210 444 ntBASIC6.36□□□□□ -1.39
ATF4P18848 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC6.36□□□□□ -1.39
ATF4P18848 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATF4P18848 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC6.36□□□□□ -1.39
ATF4P18848 AC120349.2-201ENST00000625002 298 ntBASIC6.36□□□□□ -1.39
ATF4P18848 FLII-230ENST00000628188 156 ntTSL 5 BASIC6.36□□□□□ -1.39
ATF4P18848 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC6.36□□□□□ -1.39
ATF4P18848 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.36□□□□□ -1.39
ATF4P18848 AC006927.3-201ENST00000638789 384 ntBASIC6.36□□□□□ -1.39
ATF4P18848 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
ATF4P18848 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATF4P18848 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ATF4P18848 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATF4P18848 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ATF4P18848 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATF4P18848 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.35□□□□□ -1.39
ATF4P18848 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.35□□□□□ -1.39
ATF4P18848 AC092104.1-201ENST00000497346 1441 ntBASIC6.35□□□□□ -1.39
ATF4P18848 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.35□□□□□ -1.39
ATF4P18848 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.35□□□□□ -1.39
ATF4P18848 AC093775.1-201ENST00000624154 1868 ntBASIC6.35□□□□□ -1.39
ATF4P18848 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.35□□□□□ -1.39
ATF4P18848 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.35□□□□□ -1.39
ATF4P18848 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 MIR135B-201ENST00000362189 97 ntBASIC6.35□□□□□ -1.39
ATF4P18848 RNU4-75P-201ENST00000364621 146 ntBASIC6.35□□□□□ -1.39
ATF4P18848 Y_RNA.302-201ENST00000364997 102 ntBASIC6.35□□□□□ -1.39
ATF4P18848 AL451142.1-201ENST00000375867 775 ntBASIC6.35□□□□□ -1.39
ATF4P18848 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ATF4P18848 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATF4P18848 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC6.35□□□□□ -1.39
ATF4P18848 NCSTNP1-201ENST00000406229 144 ntBASIC6.35□□□□□ -1.39
ATF4P18848 Y_RNA.619-201ENST00000410951 90 ntBASIC6.35□□□□□ -1.39
ATF4P18848 AP000534.2-201ENST00000412729 568 ntBASIC6.35□□□□□ -1.39
ATF4P18848 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC6.35□□□□□ -1.39
ATF4P18848 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms