Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.35□□□□□ -1.39
SNX9Q9Y5X1 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 RNU1-150P-201ENST00000362491 162 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 AL445687.2-201ENST00000458156 728 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 RPL5P16-201ENST00000471467 790 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 AL355032.1-201ENST00000472981 438 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 RNU6-1334P-201ENST00000516032 105 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 RN7SKP288-201ENST00000516227 268 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 IGKV2-4-201ENST00000523070 340 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 OR4A42P-201ENST00000531397 938 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 AL356801.1-201ENST00000559320 294 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 TXNP4-201ENST00000575018 310 ntBASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SNX9Q9Y5X1 ICE2P1-201ENST00000512800 1849 ntBASIC6.34□□□□□ -1.4
SNX9Q9Y5X1 GTF2IP4-201ENST00000453092 2054 ntBASIC6.34□□□□□ -1.4
SNX9Q9Y5X1 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 RNA5SP510-201ENST00000364697 99 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AL096800.1-201ENST00000405326 893 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AC126120.1-201ENST00000431082 470 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AL663074.2-201ENST00000440621 479 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AC011476.1-201ENST00000466725 307 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 PFN1P6-201ENST00000476786 399 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 RPS26P24-201ENST00000497656 331 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 GARSP1-201ENST00000570895 719 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AC027243.2-201ENST00000602530 724 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 FAM27E4-201ENST00000605259 342 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AL353684.1-201ENST00000622677 1120 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AC103798.2-201ENST00000624292 632 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AP000550.3-201ENST00000637734 379 ntBASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SNX9Q9Y5X1 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 PDZK1P1-202ENST00000425209 1350 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 WDR95P-201ENST00000425638 1542 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 OR52B3P-201ENST00000314715 928 ntBASIC6.32□□□□□ -1.4
SNX9Q9Y5X1 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms