Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AC068726.1-201ENST00000610993 341 ntBASIC6.9□□□□□ -1.3
PCDHB4Q9Y5E5 AL352984.2-201ENST00000611153 546 ntBASIC6.9□□□□□ -1.3
PCDHB4Q9Y5E5 AC098679.4-201ENST00000624241 654 ntBASIC6.9□□□□□ -1.3
PCDHB4Q9Y5E5 LINC02495-203ENST00000636704 242 ntBASIC6.9□□□□□ -1.3
PCDHB4Q9Y5E5 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHB4Q9Y5E5 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
PCDHB4Q9Y5E5 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.9□□□□□ -1.31
PCDHB4Q9Y5E5 AC011455.2-201ENST00000599320 3336 ntBASIC6.9□□□□□ -1.31
PCDHB4Q9Y5E5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
PCDHB4Q9Y5E5 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
PCDHB4Q9Y5E5 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.9□□□□□ -1.31
PCDHB4Q9Y5E5 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHB4Q9Y5E5 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.9□□□□□ -1.31
PCDHB4Q9Y5E5 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.9□□□□□ -1.31
PCDHB4Q9Y5E5 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC027279.1-201ENST00000568885 4284 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 STAG3L4-201ENST00000352103 530 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 SNORA79B-201ENST00000410557 148 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 SLC20A1P1-201ENST00000413906 956 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 UBE2V1P9-201ENST00000414760 368 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC083862.1-201ENST00000427378 1242 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC096638.2-201ENST00000434965 711 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC010374.1-201ENST00000503762 1237 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC114324.2-202ENST00000503812 134 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC018645.1-201ENST00000505003 109 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC004923.2-201ENST00000529649 369 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AL356801.1-201ENST00000559320 294 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 MIR212-201ENST00000586026 110 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AC091193.1-201ENST00000604640 448 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AL589743.6-201ENST00000611025 117 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 AP001157.1-201ENST00000550837 2339 ntBASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHB4Q9Y5E5 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 SNX18P3-202ENST00000565670 1750 ntBASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 AL353743.3-201ENST00000442109 1468 ntBASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 CASC19-255ENST00000641733 1385 ntBASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 CXADRP1-201ENST00000398098 1095 ntBASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 RN7SKP97-201ENST00000410966 333 ntBASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 AC016907.1-201ENST00000419483 435 ntBASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 VN1R42P-201ENST00000424651 344 ntBASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDHB4Q9Y5E5 AL445991.1-201ENST00000450381 475 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms