Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC016027.4-201ENST00000450866 277 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 FRG2FP-204ENST00000453982 852 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC239798.3-201ENST00000454459 408 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC019084.1-201ENST00000457337 432 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 CTSLP6-201ENST00000458273 1002 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC083795.1-201ENST00000491760 320 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 RN7SL568P-201ENST00000493069 298 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC060780.2-201ENST00000589047 198 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC073333.2-201ENST00000603589 769 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 uc_338.31-201ENST00000615595 186 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 MIR6721-201ENST00000617181 87 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AL357140.4-201ENST00000636827 412 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AC006484.1-201ENST00000435086 1884 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 RNU6-249P-201ENST00000363016 102 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AL359885.1-201ENST00000415786 903 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 HMGB1P7-201ENST00000450921 612 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 PPIAP7-201ENST00000454070 489 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 RN7SL254P-201ENST00000460609 284 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 OR7E99P-201ENST00000505750 922 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AC078899.1-201ENST00000521432 1185 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AP000620.1-201ENST00000527147 504 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AC007346.1-201ENST00000569208 867 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AC138207.8-204ENST00000579588 527 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AC074140.1-201ENST00000621617 208 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 SNX18P12-201ENST00000624821 759 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AL357562.1-201ENST00000624911 609 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 AL513548.1-201ENST00000562904 1724 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 THAP12P9-201ENST00000503971 2360 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 MTCO1P28-201ENST00000574177 1528 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 RBMY1HP-201ENST00000382759 1389 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 PPBPP2-201ENST00000513150 1362 ntBASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.16□□□□□ -1.58
RHBDD3Q9Y3P4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 AC140134.1-201ENST00000511830 3544 ntBASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 AC093849.1-201ENST00000563631 2209 ntBASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RHBDD3Q9Y3P4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 RN7SKP279-201ENST00000411383 298 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms