Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MIR193BHG-214ENST00000641765 509 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 AL731532.1-201ENST00000623972 4236 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 IMMTP1-201ENST00000435590 2219 ntBASIC5.23□□□□□ -1.57
CLCF1Q9UBD9 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AC027279.1-201ENST00000568885 4284 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AL360271.1-201ENST00000395679 510 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 RPL23AP18-201ENST00000416139 468 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 RPL34P3-201ENST00000421454 338 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 RPL12P16-201ENST00000431098 498 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 DEFA9P-201ENST00000433042 285 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 CYCSP22-201ENST00000517555 339 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 TMEM97P2-201ENST00000517841 403 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AC244502.2-201ENST00000543361 851 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AL049779.3-201ENST00000557141 606 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AC016252.1-201ENST00000609721 474 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 RN7SL544P-201ENST00000617232 284 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 RN7SL763P-201ENST00000620922 284 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AC018659.2-201ENST00000624690 715 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AC022919.1-201ENST00000624979 626 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 AC137056.2-201ENST00000624055 1958 ntBASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCF1Q9UBD9 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLCF1Q9UBD9 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.21□□□□□ -1.57
CLCF1Q9UBD9 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CLCF1Q9UBD9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
CLCF1Q9UBD9 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CLCF1Q9UBD9 AC130304.1-201ENST00000622942 2385 ntBASIC5.21□□□□□ -1.57
CLCF1Q9UBD9 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.21□□□□□ -1.57
CLCF1Q9UBD9 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AC114876.1-201ENST00000490962 1366 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 MIR323A-201ENST00000362199 86 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 NME1P1-201ENST00000420914 382 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AP000281.1-201ENST00000444036 316 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 RPS27AP2-201ENST00000457576 465 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AL603882.1-201ENST00000463059 681 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 RPS23P6-201ENST00000466136 431 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 RPSAP37-201ENST00000470913 821 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 RN7SKP288-201ENST00000516227 268 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AC112191.2-201ENST00000522428 333 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 IGLV3-30-201ENST00000524362 298 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 SETP3-201ENST00000581726 813 ntBASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.21□□□□□ -1.58
CLCF1Q9UBD9 FAM72A-208ENST00000607379 1139 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms