Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TREX1Q9NSU2 IFIT1P1-201ENST00000400497 1449 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 MTND5P12-201ENST00000502851 1449 ntBASIC5.74□□□□□ -1.49
TREX1Q9NSU2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 GTF2IP4-201ENST00000453092 2054 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC027279.4-201ENST00000624371 2072 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC114774.1-201ENST00000507410 1770 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC123769.1-201ENST00000530992 3192 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AL159987.1-201ENST00000347911 293 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 SUGT1P2-201ENST00000379452 992 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC004386.1-201ENST00000393214 761 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 NACAP7-201ENST00000407371 609 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 BX323845.3-201ENST00000428215 527 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC126120.1-201ENST00000431082 470 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 RPS23P2-201ENST00000463671 415 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC009120.1-201ENST00000493458 473 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 OR8Q1P-201ENST00000526467 655 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC084824.2-201ENST00000548906 345 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC068305.2-201ENST00000550567 1205 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 MIR4260-201ENST00000583107 67 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 MIR7109-201ENST00000613748 65 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AC073593.1-201ENST00000624500 411 ntBASIC5.73□□□□□ -1.49
TREX1Q9NSU2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
TREX1Q9NSU2 AL591135.1-201ENST00000401578 5914 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 UGT2B24P-201ENST00000514441 1597 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AL137058.3-201ENST00000624531 3099 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 RN7SKP275-201ENST00000364626 301 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 RNU11-201ENST00000387069 134 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 OR10T1P-201ENST00000424327 947 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC099670.2-201ENST00000435130 321 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC110602.1-201ENST00000437414 318 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 RPSAP37-201ENST00000470913 821 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC012123.2-201ENST00000485809 248 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 RN7SL170P-201ENST00000487098 295 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 RPL37P23-201ENST00000492641 294 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 RPS17P5-201ENST00000498293 408 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC024405.1-201ENST00000532521 1042 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AL360012.1-201ENST00000602813 131 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC009237.12-201ENST00000604755 742 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC005618.4-201ENST00000625053 554 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC083899.1-201ENST00000454465 3819 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 AC006206.1-201ENST00000544842 3387 ntBASIC5.72□□□□□ -1.49
TREX1Q9NSU2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms