Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC068620.3-201ENST00000602749 560 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC108673.3-201ENST00000609183 335 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 AL133370.2-201ENST00000619934 439 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 SNORA17.5-201ENST00000630429 132 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC103703.1-201ENST00000634783 663 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 AL356118.1-201ENST00000635272 1078 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC099654.9-201ENST00000637055 678 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC006927.4-201ENST00000639187 543 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 RBMY1HP-201ENST00000382759 1389 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 SAMM50P1-201ENST00000455403 1399 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC110597.1-201ENST00000562669 3176 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 FO082842.1-201ENST00000423552 1370 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 Z86062.1-201ENST00000406773 777 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AL512422.1-201ENST00000407033 553 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 RPS7P8-201ENST00000418311 581 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 RPL35AP31-201ENST00000418340 337 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC007563.3-201ENST00000433233 371 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 PTP4A1P3-201ENST00000433661 420 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 GAPDHP75-201ENST00000433910 943 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 FABP5P2-201ENST00000439042 408 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 TRIM60P16-201ENST00000444048 694 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC092106.1-201ENST00000444291 373 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC005077.1-201ENST00000449226 375 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 CCRL1P1-201ENST00000449542 1053 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 ACA64.1-201ENST00000459171 127 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC007998.1-201ENST00000474156 672 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 PPIAP19-201ENST00000486414 492 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 RN7SL101P-201ENST00000496350 279 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 GTF2IP9-201ENST00000502460 301 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 HMGB1P3-201ENST00000502802 616 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 PSMA2P2-201ENST00000504319 686 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC011411.1-201ENST00000509592 876 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 Y_RNA.667-201ENST00000516212 107 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 SCARNA18.1-201ENST00000516330 83 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 OR56A7P-201ENST00000524865 941 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AP000662.1-201ENST00000530952 487 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC011445.2-201ENST00000599274 173 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC012213.4-201ENST00000606457 354 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AL513218.1-201ENST00000606527 391 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 AC006924.1-201ENST00000610750 559 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AL445528.2-201ENST00000620582 470 ntBASIC7.01□□□□□ -1.29
VTA1Q9NP79 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
VTA1Q9NP79 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VTA1Q9NP79 AL359195.2-201ENST00000623657 4412 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms