Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 SNORD56.6-201ENST00000384569 71 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AL391422.1-201ENST00000402155 436 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AL596448.1-201ENST00000415024 392 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 GTF3AP1-201ENST00000416942 1004 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 PRUNEP1-201ENST00000425846 705 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 LYPLA1P1-201ENST00000434514 622 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC012075.1-201ENST00000436549 580 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC009120.1-201ENST00000493458 473 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 TMEM97P2-201ENST00000517841 403 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC027026.1-201ENST00000532323 742 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 OR4A6P-201ENST00000534364 970 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 HSPE1P2-201ENST00000554777 306 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AL133481.2-203ENST00000607558 139 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 AP002833.3-201ENST00000625075 2265 ntBASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KIAA1549Q9HCM3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 AC114786.1-201ENST00000512892 1415 ntBASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 RNU1-59P-201ENST00000364829 162 ntBASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 NME1P1-201ENST00000420914 382 ntBASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 RBM22P1-201ENST00000578589 1214 ntBASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 AP001357.1-201ENST00000586304 1053 ntBASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 U1.25-201ENST00000614085 162 ntBASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 U1.34-201ENST00000618578 162 ntBASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 U1.31-201ENST00000620022 160 ntBASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.15□□□□□ -1.58
KIAA1549Q9HCM3 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AC130360.2-201ENST00000533477 1556 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AC011933.2-201ENST00000578539 2790 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AL159987.1-201ENST00000347911 293 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 RN7SKP162-201ENST00000363605 345 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 RNA5SP30-201ENST00000365552 115 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 SDHDP6-201ENST00000414693 480 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AC011225.1-201ENST00000457751 369 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 RN7SL352P-201ENST00000466002 277 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AL136038.1-201ENST00000497246 351 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AC079600.1-201ENST00000550326 297 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 MIR4505-201ENST00000582238 73 ntBASIC5.15□□□□□ -1.59
KIAA1549Q9HCM3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms