Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 RNU2-18P-201ENST00000411224 162 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AL354868.1-201ENST00000417077 482 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 RPL24P2-201ENST00000421023 475 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 CRIP1P1-201ENST00000427567 185 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AMYP1-201ENST00000440059 1023 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 RPL12P39-201ENST00000455456 496 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC068228.1-201ENST00000461723 211 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 RPL37P23-201ENST00000492641 294 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC110056.1-201ENST00000525759 911 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 ZNF322P1-201ENST00000568013 1209 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 MIR4271-201ENST00000582451 67 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC009303.3-201ENST00000591103 736 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC005520.3-201ENST00000602874 370 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AL133481.2-203ENST00000607558 139 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC022400.9-201ENST00000623633 273 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 WDR95P-201ENST00000425638 1542 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 GNL2P1-201ENST00000451274 2190 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 RPL11P3-201ENST00000395256 523 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 VN1R12P-201ENST00000403778 876 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 ATP5LP2-201ENST00000440646 311 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AL445466.1-201ENST00000448432 357 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 PPIAP27-201ENST00000453800 265 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC023194.2-201ENST00000465398 406 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC092865.4-201ENST00000477936 615 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 RN7SKP238-201ENST00000516483 249 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 RNU4-18P-201ENST00000516751 149 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 MIR2117-201ENST00000516780 80 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AP002981.1-201ENST00000517692 975 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC008507.3-201ENST00000585753 472 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AL513327.3-201ENST00000602618 469 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC012467.1-201ENST00000607740 256 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AL162574.2-201ENST00000614618 657 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC103798.2-201ENST00000624292 632 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC079776.5-201ENST00000641920 211 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 PSG10P-201ENST00000501199 1500 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 IFIT1P1-201ENST00000400497 1449 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 AC004076.2-201ENST00000620532 3323 ntBASIC6.07□□□□□ -1.44
PCDH9Q9HC56 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
PCDH9Q9HC56 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDH9Q9HC56 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms