Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RN7SKP268-201ENST00000411107 316 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 SETP15-201ENST00000412724 337 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 MTND4LP17-201ENST00000414607 293 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 UBE2V1P10-201ENST00000414685 269 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 VN1R31P-201ENST00000417498 730 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 MYL6P3-201ENST00000436904 432 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC092393.1-201ENST00000439625 742 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC000041.1-201ENST00000439655 175 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 CUBNP2-201ENST00000443534 1139 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AL356133.1-201ENST00000444762 372 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AL929288.2-201ENST00000446368 407 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC009961.3-201ENST00000449832 765 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 RPS6P2-201ENST00000454208 705 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 RPL5P12-201ENST00000477071 851 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 RN7SL379P-201ENST00000479912 293 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC133963.2-201ENST00000513686 578 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 RN7SKP34-201ENST00000516142 244 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 IGLC4-201ENST00000517690 248 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC130366.1-201ENST00000526505 1192 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC007115.1-201ENST00000546853 234 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC069240.2-201ENST00000550242 609 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC007255.2-201ENST00000604053 631 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 PTCHD3P1-201ENST00000612350 537 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 MIR6883-201ENST00000614952 78 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AP003072.4-201ENST00000624580 310 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 MIR665-201ENST00000635949 72 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 BX005019.1-201ENST00000561881 1810 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 DLEU2L-201ENST00000371086 3555 ntBASIC6.1□□□□□ -1.43
SEC61A2Q9H9S3 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 TRIM53CP-201ENST00000531490 1354 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 NEK2P2-201ENST00000438441 1338 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 SNORD113-6-201ENST00000363345 75 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 EEF1GP6-201ENST00000402309 905 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 MTND4P3-201ENST00000417829 541 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 RPF2P1-201ENST00000424137 906 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 PHB2P1-201ENST00000434943 890 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC009518.3-201ENST00000438972 253 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 RPS10P14-201ENST00000440748 502 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 Z95152.1-201ENST00000453556 656 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 AL133477.1-201ENST00000457472 514 ntBASIC6.09□□□□□ -1.43
SEC61A2Q9H9S3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms