Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 GDI2P1-201ENST00000429312 1336 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC011592.1-201ENST00000624647 3634 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC090017.1-201ENST00000548612 1779 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC034111.1-201ENST00000562143 3770 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC119744.1-201ENST00000454746 1715 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PRM1-201ENST00000312511 424 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 OR4A15-201ENST00000314706 1035 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 SNRPEP3-201ENST00000338402 276 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 SNORA63-201ENST00000363450 132 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 FRG1JP-201ENST00000376334 931 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 RNU6-1227P-201ENST00000383981 107 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 RNU6-533P-201ENST00000384144 107 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC104297.1-201ENST00000393779 870 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 FDPSP5-201ENST00000399474 1057 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AL590143.1-201ENST00000405071 138 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 RN7SKP94-201ENST00000411044 284 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 RNA5SP221-201ENST00000411271 103 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 LINC00159-201ENST00000411605 438 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 CES5AP1-202ENST00000415114 974 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AL513302.1-201ENST00000415679 428 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC007390.1-201ENST00000415722 356 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 ATP5G1P8-201ENST00000416294 294 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 MTND3P17-201ENST00000416968 344 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 NPM1P12-201ENST00000423757 834 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 SDCBPP2-201ENST00000424643 885 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 RIMKLBP2-201ENST00000424737 654 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 CFL1P7-201ENST00000424759 486 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 USP9YP9-201ENST00000429406 715 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 PYHIN5P-201ENST00000431627 723 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 AF130417.1-201ENST00000432412 478 ntTSL 3 BASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 BTF3P10-201ENST00000433415 495 ntBASIC2.18□□□□□ -2.06
LCE3DQ9BYE3 NDUFA5P4-201ENST00000436704 385 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms