Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RSPO3Q9BXY4 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 UGT2B24P-201ENST00000514441 1597 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC016745.2-201ENST00000608834 3443 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC117409.1-201ENST00000470499 1310 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC027088.4-201ENST00000611559 1947 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 RNA5SP477-201ENST00000362639 119 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 RNU11-201ENST00000387069 134 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC005042.1-201ENST00000393397 800 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC016739.1-201ENST00000405359 345 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC007679.3-201ENST00000434035 414 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC023194.2-201ENST00000465398 406 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 RPL12P24-201ENST00000474907 486 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC093815.1-201ENST00000508637 280 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 UGT2A3P7-201ENST00000510485 734 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 RN7SKP253-201ENST00000516424 309 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 RNA5SP438-201ENST00000516561 112 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 IGLV3-24-201ENST00000517477 197 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC079905.1-201ENST00000549280 475 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 HMGN2P47-201ENST00000559378 272 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 CYCSP38-201ENST00000559840 322 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AL360012.1-201ENST00000602813 131 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AL139099.4-201ENST00000614802 114 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 MIR6071-201ENST00000616741 78 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC093225.1-201ENST00000506867 1408 ntBASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.29□□□□□ -1.56
RSPO3Q9BXY4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 LYARP1-201ENST00000436977 1501 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC092451.3-201ENST00000625067 1343 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 NIFKP3-201ENST00000417799 865 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 KCTD9P1-201ENST00000430462 1167 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 MTND2P40-201ENST00000436718 841 ntBASIC5.28□□□□□ -1.56
RSPO3Q9BXY4 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms