Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 SNORA51.9-201ENST00000384295 124 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 MIR551B-201ENST00000384984 96 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 GCNT1P4-201ENST00000404096 329 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 RN7SKP29-201ENST00000410957 272 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AL357752.1-201ENST00000412817 349 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 SMC4P1-201ENST00000414479 527 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 OR10T1P-201ENST00000424327 947 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AL139158.1-201ENST00000424719 340 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AC139365.2-201ENST00000517972 253 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 DHFRP1-201ENST00000579682 559 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AC139792.1-201ENST00000607051 647 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 MIR6774-201ENST00000614651 70 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 uc_338.31-201ENST00000615595 186 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 HCFC2P1-201ENST00000392864 1592 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 MTCO1P46-201ENST00000451639 1491 ntBASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.81□□□□□ -1.64
HDHD3Q9BSH5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 Z95114.1-201ENST00000624264 14574 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC005042.1-201ENST00000393397 800 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 RN7SKP146-201ENST00000410242 334 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AL133482.1-201ENST00000415988 498 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 RPS27AP6-201ENST00000427962 448 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 NPM1P18-201ENST00000434232 732 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 BTG3P1-201ENST00000435859 716 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 HMGB1P7-201ENST00000450921 612 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 GEMIN2P1-201ENST00000454246 752 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC098847.1-201ENST00000473094 348 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC092865.4-201ENST00000477936 615 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 RN7SL362P-201ENST00000494228 267 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 RPS17P5-201ENST00000498293 408 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC009879.1-201ENST00000520029 839 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC009962.1-201ENST00000567327 3813 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 MIR6721-201ENST00000617181 87 ntBASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDHD3Q9BSH5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms