Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MAPK10-270ENST00000641102 3538 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC015689.2-201ENST00000528172 1738 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 OR13C1P-202ENST00000641378 2919 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AL161901.1-201ENST00000624954 3425 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 FUNDC2P3-201ENST00000334716 533 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 RNA5SP394-201ENST00000364216 119 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 RNA5SP510-201ENST00000364697 99 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 RNA5SP30-201ENST00000365552 115 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 RNA5SP284-201ENST00000384547 118 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 EEF1B2P8-201ENST00000414101 671 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 NENFP1-201ENST00000419476 466 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 NME1P1-201ENST00000420914 382 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 RNGTTP1-201ENST00000420965 728 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC073109.1-201ENST00000445066 978 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 RPS3AP15-201ENST00000483874 781 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC021146.10-201ENST00000515628 706 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 SNORD46.2-201ENST00000516021 102 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 SCARNA9-201ENST00000530422 353 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC139697.1-201ENST00000548429 745 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 HSPE1P2-201ENST00000554777 306 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC063977.5-201ENST00000601044 974 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AP001962.1-201ENST00000624114 559 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AL390318.1-201ENST00000624564 687 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 AC002090.1-201ENST00000625000 2138 ntBASIC4.75□□□□□ -1.65
GAFA1Q96PS6 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.75□□□□□ -1.65
GAFA1Q96PS6 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 RN7SKP292-201ENST00000365522 317 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 RNU1-136P-201ENST00000384181 164 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 RPS6P23-201ENST00000413224 722 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 BX119321.1-201ENST00000428912 797 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 RPS29P14-201ENST00000431518 171 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AC144530.1-201ENST00000452862 555 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AC007998.1-201ENST00000474156 672 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AC117394.1-201ENST00000477323 567 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 RNU6-615P-201ENST00000516065 106 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AC022826.1-201ENST00000519383 805 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 MRPS16P1-201ENST00000523462 412 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 TRIM51DP-201ENST00000529746 596 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AGGF1P7-201ENST00000562369 913 ntBASIC4.74□□□□□ -1.65
GAFA1Q96PS6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.74□□□□□ -1.65
GAFA1Q96PS6 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms