Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
AP1S3Q96PC3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.36□□□□□ -1.71
AP1S3Q96PC3 AC099654.3-201ENST00000447087 1546 ntBASIC4.36□□□□□ -1.71
AP1S3Q96PC3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.36□□□□□ -1.71
AP1S3Q96PC3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AP1S3Q96PC3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 RNU105B-201ENST00000364478 208 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 RNA5SP485-201ENST00000365053 119 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 RNA5SP156-201ENST00000410250 110 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 RN7SKP97-201ENST00000410966 333 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 OSTCP4-201ENST00000424397 449 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 NPM1P33-201ENST00000438918 872 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 CXCR2P1-202ENST00000443392 1074 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 NPM1P9-201ENST00000453156 844 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC083795.1-201ENST00000491760 320 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AL121594.2-201ENST00000541658 472 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AL390726.5-202ENST00000564800 256 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC119403.2-201ENST00000590960 598 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 RNU6-84P-201ENST00000607737 102 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 AF287957.1-201ENST00000607368 1595 ntBASIC4.35□□□□□ -1.71
AP1S3Q96PC3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AP1S3Q96PC3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC130304.1-201ENST00000622942 2385 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 RNA5SP211-201ENST00000365516 117 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 MRPL32P1-201ENST00000406301 247 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AL139135.1-201ENST00000412675 209 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AL138479.1-201ENST00000426913 484 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC016027.4-201ENST00000450866 277 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AL133351.3-201ENST00000454998 193 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC104164.1-201ENST00000460282 590 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AL603882.1-201ENST00000463059 681 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 PFN1P6-201ENST00000476786 399 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 OR7E157P-201ENST00000494376 911 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 AC009567.2-201ENST00000502989 349 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 OR7E99P-201ENST00000505750 922 ntBASIC4.34□□□□□ -1.71
AP1S3Q96PC3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AP1S3Q96PC3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms