Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 MIR99A-201ENST00000384906 81 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 MIR187-201ENST00000385062 109 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 RN7SKP232-201ENST00000410170 290 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 UBE2V1P10-201ENST00000414685 269 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC006960.1-201ENST00000419980 153 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC004074.1-201ENST00000421810 1063 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC246680.2-201ENST00000422106 389 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 CYP4F32P-201ENST00000426492 504 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC124944.2-201ENST00000429866 1242 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 MYL6P3-201ENST00000436904 432 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 HMGN1P6-201ENST00000438508 291 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AL050341.1-201ENST00000447743 313 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 HMGB1P5-202ENST00000451497 985 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AL034399.1-201ENST00000451535 380 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AL354872.1-201ENST00000456361 967 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 NMNAT1P3-201ENST00000457517 888 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AL079303.1-201ENST00000486611 463 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC113347.3-201ENST00000509113 148 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC008868.1-201ENST00000509786 737 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC110775.1-201ENST00000513721 462 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 RNA5SP96-201ENST00000516041 107 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 SEPT10P1-201ENST00000517342 1162 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC060788.1-201ENST00000521318 469 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC130366.1-201ENST00000526505 1192 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC069240.2-201ENST00000550242 609 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 SIGLEC31P-201ENST00000594237 551 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AP003465.2-201ENST00000602571 373 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC078795.2-201ENST00000602835 1252 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC116165.2-201ENST00000616705 206 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC139769.3-201ENST00000618383 175 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AP005212.3-201ENST00000619964 528 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC073534.2-201ENST00000620377 381 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC092656.1-203ENST00000624134 423 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC092192.1-201ENST00000633154 1018 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC140479.4-205ENST00000636339 820 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC015871.3-201ENST00000618835 2261 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 AC017007.4-201ENST00000503353 1352 ntBASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.56□□□□□ -1.36
PTCHD1Q96NR3 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 CDY11P-201ENST00000447168 1651 ntBASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTCHD1Q96NR3 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms