Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KHDC1P1-201ENST00000511053 508 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 RNA5SP96-201ENST00000516041 107 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 RN7SKP288-201ENST00000516227 268 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 BCAS2P1-201ENST00000528022 632 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AC135983.3-201ENST00000528049 1226 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AC037479.1-201ENST00000558361 625 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 RN7SL657P-201ENST00000582431 293 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AL589765.6-201ENST00000601909 549 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AL390877.1-201ENST00000605704 214 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AL451049.1-201ENST00000608672 497 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 uc_338.26-201ENST00000612659 160 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 MIR6737-201ENST00000617385 70 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 MIR6503-201ENST00000622884 86 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AC068213.1-201ENST00000625124 226 ntBASIC5.77□□□□□ -1.49
VPS33AQ96AX1 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS33AQ96AX1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC018717.1-201ENST00000457712 1505 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC010132.2-201ENST00000295493 1043 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 RNU6-1320P-201ENST00000390838 107 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 RNU6-1269P-201ENST00000391139 107 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 VIM2P-201ENST00000402383 1294 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AL512504.1-201ENST00000415494 778 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 MTND2P12-201ENST00000417560 1252 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 MTCO1P45-201ENST00000431457 267 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 OR6R1P-201ENST00000431838 940 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC094019.1-201ENST00000434678 472 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC128677.1-201ENST00000436016 442 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC234771.4-201ENST00000441416 730 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 POU5F1P5-201ENST00000445059 658 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 RNU6-599P-201ENST00000459383 107 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 RNU6-1193P-201ENST00000459461 107 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 RPL34P33-201ENST00000486062 334 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC015524.1-201ENST00000491585 472 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 NPM1P28-201ENST00000492269 840 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 RN7SL284P-201ENST00000498823 275 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 RNU6-368P-201ENST00000620928 107 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 RNU6-538P-201ENST00000622329 107 ntBASIC5.76□□□□□ -1.49
VPS33AQ96AX1 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VPS33AQ96AX1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 BCORP1-203ENST00000513194 5093 ntBASIC5.75□□□□□ -1.49
VPS33AQ96AX1 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS33AQ96AX1 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms