Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC4Q92889 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC4Q92889 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC4Q92889 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC4Q92889 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC4Q92889 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AL591135.1-201ENST00000401578 5914 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC4Q92889 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC4Q92889 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC4Q92889 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC4Q92889 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
ERCC4Q92889 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC4Q92889 RN7SKP221-201ENST00000410420 301 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC4Q92889 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
ERCC4Q92889 CETN4P-201ENST00000432407 469 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC4Q92889 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AC104164.3-201ENST00000467363 1258 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AC012123.2-201ENST00000485809 248 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC4Q92889 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AC021146.5-201ENST00000503544 545 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AC008945.1-201ENST00000505144 499 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 PCNAP1-201ENST00000505363 709 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AC026782.2-201ENST00000510845 636 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.06□□□□□ -1.28
ERCC4Q92889 RN7SKP265-201ENST00000516448 223 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AC034205.1-201ENST00000520621 638 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AC104115.2-201ENST00000523026 687 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 SOX5P1-201ENST00000524155 1127 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AP001636.2-201ENST00000525517 696 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC4Q92889 HMGN1P26-201ENST00000558737 303 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC4Q92889 AC005332.4-201ENST00000592752 579 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.06□□□□□ -1.28
ERCC4Q92889 LSM1P2-201ENST00000604911 322 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AL136097.3-201ENST00000611097 505 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AC120349.3-201ENST00000624377 529 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC4Q92889 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC4Q92889 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.06□□□□□ -1.28
ERCC4Q92889 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC4Q92889 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
ERCC4Q92889 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
ERCC4Q92889 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
ERCC4Q92889 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC4Q92889 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ERCC4Q92889 METTL5-202ENST00000308099 629 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC4Q92889 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
ERCC4Q92889 SNORD16-201ENST00000362803 99 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
ERCC4Q92889 DPPA2P2-201ENST00000418220 897 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC4Q92889 RPS7P14-201ENST00000426405 583 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 TRBV26OR9-2-201ENST00000432077 293 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC4Q92889 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC4Q92889 AL022324.2-201ENST00000434827 780 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 ELOCP13-201ENST00000443934 329 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC099063.2-201ENST00000446360 662 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC4Q92889 AC112187.1-201ENST00000455837 479 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 RN7SL790P-201ENST00000474043 298 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC090543.1-201ENST00000492168 485 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 OR2A3P-201ENST00000493774 953 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 BOLA3P3-201ENST00000505182 232 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC4Q92889 AL158068.1-201ENST00000506116 616 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC4Q92889 PRELID3BP5-201ENST00000508612 460 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC113191.1-201ENST00000517759 403 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC4Q92889 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.05□□□□□ -1.28
ERCC4Q92889 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 LRRC34P1-201ENST00000542742 915 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC7.05□□□□□ -1.28
ERCC4Q92889 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC4Q92889 AGGF1P5-201ENST00000567900 919 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC027796.1-201ENST00000575593 512 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC4Q92889 AC006924.1-201ENST00000610750 559 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC087683.2-201ENST00000611384 326 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms