Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MITF-203ENST00000328528 4680 ntTSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 AC016027.5-201ENST00000427227 210 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 RPS3AP38-201ENST00000435889 763 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 AC092647.3-201ENST00000443044 633 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 AC008897.1-201ENST00000494006 347 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 AC011447.4-201ENST00000587562 111 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC9.36□□□□□ -0.91
TOPBP1Q92547 MAPK10-350ENST00000641777 965 ntBASIC9.36□□□□□ -0.91
TOPBP1Q92547 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
TOPBP1Q92547 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TOPBP1Q92547 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TOPBP1Q92547 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 LRRC37A9P-201ENST00000603850 5376 ntBASIC9.35□□□□□ -0.91
TOPBP1Q92547 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
TOPBP1Q92547 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
TOPBP1Q92547 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 RN7SKP6-201ENST00000364795 319 ntBASIC9.35□□□□□ -0.91
TOPBP1Q92547 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 TPT1P13-201ENST00000449760 499 ntBASIC9.35□□□□□ -0.91
TOPBP1Q92547 ST13P12-201ENST00000508958 1094 ntBASIC9.35□□□□□ -0.91
TOPBP1Q92547 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 AC087283.1-201ENST00000604029 1074 ntBASIC9.35□□□□□ -0.91
TOPBP1Q92547 AL133406.3-201ENST00000606817 541 ntBASIC9.35□□□□□ -0.91
TOPBP1Q92547 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
TOPBP1Q92547 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TOPBP1Q92547 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
TOPBP1Q92547 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TOPBP1Q92547 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
TOPBP1Q92547 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
TOPBP1Q92547 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TOPBP1Q92547 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TOPBP1Q92547 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
TOPBP1Q92547 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
TOPBP1Q92547 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC9.34□□□□□ -0.91
TOPBP1Q92547 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TOPBP1Q92547 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TOPBP1Q92547 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TOPBP1Q92547 SNURFL-201ENST00000309296 343 ntBASIC9.34□□□□□ -0.91
TOPBP1Q92547 RN7SKP113-201ENST00000363891 295 ntBASIC9.34□□□□□ -0.91
TOPBP1Q92547 DNAJA1P4-201ENST00000406473 1166 ntBASIC9.34□□□□□ -0.91
TOPBP1Q92547 RN7SKP126-201ENST00000411143 300 ntBASIC9.34□□□□□ -0.91
TOPBP1Q92547 AC007161.1-204ENST00000423039 460 ntBASIC9.34□□□□□ -0.91
TOPBP1Q92547 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC9.34□□□□□ -0.91
TOPBP1Q92547 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC9.34□□□□□ -0.91
TOPBP1Q92547 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC9.34□□□□□ -0.91
TOPBP1Q92547 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TOPBP1Q92547 OLMALINC-203ENST00000641087 3779 ntBASIC9.34□□□□□ -0.91
TOPBP1Q92547 AC009831.5-201ENST00000624000 3189 ntBASIC9.34□□□□□ -0.91
TOPBP1Q92547 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.34□□□□□ -0.91
TOPBP1Q92547 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
TOPBP1Q92547 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
TOPBP1Q92547 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
TOPBP1Q92547 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC9.33□□□□□ -0.92
TOPBP1Q92547 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TOPBP1Q92547 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
TOPBP1Q92547 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
TOPBP1Q92547 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
TOPBP1Q92547 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC9.33□□□□□ -0.92
TOPBP1Q92547 RNA5SP123-201ENST00000363244 119 ntBASIC9.33□□□□□ -0.92
TOPBP1Q92547 AL356967.1-201ENST00000406305 431 ntBASIC9.33□□□□□ -0.92
TOPBP1Q92547 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC9.33□□□□□ -0.92
TOPBP1Q92547 AC002075.1-201ENST00000457396 676 ntBASIC9.33□□□□□ -0.92
TOPBP1Q92547 AC004980.4-201ENST00000513375 203 ntBASIC9.33□□□□□ -0.92
TOPBP1Q92547 AL121594.2-201ENST00000541658 472 ntBASIC9.33□□□□□ -0.92
TOPBP1Q92547 AL512310.9-201ENST00000553311 948 ntBASIC9.33□□□□□ -0.92
TOPBP1Q92547 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC9.33□□□□□ -0.92
TOPBP1Q92547 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC9.33□□□□□ -0.92
TOPBP1Q92547 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TOPBP1Q92547 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
TOPBP1Q92547 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
TOPBP1Q92547 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
TOPBP1Q92547 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TOPBP1Q92547 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
TOPBP1Q92547 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TOPBP1Q92547 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 HSPA8P14-201ENST00000552265 1805 ntBASIC9.32□□□□□ -0.92
TOPBP1Q92547 AC010132.2-201ENST00000295493 1043 ntBASIC9.32□□□□□ -0.92
TOPBP1Q92547 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC9.32□□□□□ -0.92
TOPBP1Q92547 AP000346.3-201ENST00000622821 210 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms