Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 NIFKP3-201ENST00000417799 865 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AL049745.1-201ENST00000433953 286 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 HNRNPDLP2-201ENST00000455248 751 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC109462.1-201ENST00000491087 368 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 RNA5SP373-201ENST00000517271 95 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC013701.1-201ENST00000522657 465 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 MIR4301-201ENST00000577203 66 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AC009163.6-201ENST00000612367 342 ntBASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 EML5-201ENST00000380664 5910 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
ALMS1Q8TCU4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 Y_RNA.126-201ENST00000363382 111 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 RPL5P22-201ENST00000480199 884 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 SNRPCP2-201ENST00000504370 475 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC067852.5-201ENST00000589299 310 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AL023583.1-201ENST00000607518 1143 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC090527.3-201ENST00000619041 548 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 MIR7641-1-201ENST00000627518 61 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC096775.1-201ENST00000437724 448 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 FRG2FP-204ENST00000453982 852 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC002075.1-201ENST00000457396 676 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 IGHV1-14-201ENST00000523391 241 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 ATP5J2P6-201ENST00000565203 266 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC087283.1-201ENST00000604029 1074 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC105384.2-201ENST00000508433 640 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AP005432.2-201ENST00000608162 586 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AL138960.1-201ENST00000613838 513 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 EIF3FP1-201ENST00000613970 806 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 TCL6_3.1-201ENST00000619064 137 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 MGAT2P2-201ENST00000427194 797 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 H3F3BP1-201ENST00000440551 403 ntBASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC3.81□□□□□ -1.8
ALMS1Q8TCU4 AC134349.2-201ENST00000535136 910 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms