Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 OR8G7P-201ENST00000616658 848 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AL445670.1-201ENST00000618889 801 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 AC104964.3-201ENST00000606115 2860 ntBASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
CLHC1Q8NHS4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 MFSD8-239ENST00000641590 2479 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC012254.3-201ENST00000591183 2117 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AL354854.1-201ENST00000455940 1363 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 SELENOWP1-201ENST00000322792 252 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 RN7SKP250-201ENST00000363924 321 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 RN7SKP78-201ENST00000364711 318 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 MIR130B-202ENST00000385018 82 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 PEX12P1-201ENST00000400284 1048 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 RPL35AP3-201ENST00000414680 288 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 FAM183DP-201ENST00000421987 399 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 CRIP1P1-201ENST00000427567 185 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC242426.1-201ENST00000435270 960 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 RPL5P10-201ENST00000445207 894 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 RN7SL362P-201ENST00000494228 267 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 RN7SKP35-201ENST00000517210 151 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AP005119.1-201ENST00000580956 292 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC011500.1-201ENST00000601963 469 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC073389.3-201ENST00000609434 935 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 AC096708.4-201ENST00000620563 552 ntBASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLHC1Q8NHS4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.59□□□□□ -1.52
CLHC1Q8NHS4 PARP4P2-201ENST00000446672 3326 ntBASIC5.59□□□□□ -1.52
CLHC1Q8NHS4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLHC1Q8NHS4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLHC1Q8NHS4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
CLHC1Q8NHS4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLHC1Q8NHS4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLHC1Q8NHS4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 RBPJP7-201ENST00000442803 1447 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 RBPJP5-201ENST00000449433 1447 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC092451.3-201ENST00000625067 1343 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 METTL15P3-201ENST00000415522 1221 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 THEM7P-201ENST00000419556 672 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 RPL5P2-201ENST00000429598 854 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC096775.1-201ENST00000437724 448 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC023141.8-201ENST00000442554 208 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 HMGB1P7-201ENST00000450921 612 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC023245.1-201ENST00000468501 517 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC098818.1-201ENST00000478593 252 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 RN7SKP238-201ENST00000516483 249 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AP003033.2-201ENST00000528901 805 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 OR4A42P-201ENST00000531397 938 ntBASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.58□□□□□ -1.52
CLHC1Q8NHS4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms