Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ABCA11P-202ENST00000504019 2110 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL512605.1-202ENST00000441919 381 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL359955.2-201ENST00000445380 353 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 RN7SL222P-201ENST00000476452 299 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 SNORA70.20-201ENST00000516848 126 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 DCN-209ENST00000546745 1026 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC063977.5-201ENST00000601044 974 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC093297.3-201ENST00000607056 2517 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC119674.1-204ENST00000641348 1343 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC027279.4-201ENST00000624371 2072 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC006511.3-201ENST00000624929 1783 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL391261.1-201ENST00000555712 1479 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC087516.1-201ENST00000561236 2428 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC006455.6-201ENST00000426192 893 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC245452.2-201ENST00000435222 392 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 GSTA7P-201ENST00000438425 448 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC090114.3-201ENST00000479267 829 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AL671862.1-201ENST00000515851 349 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AC126177.5-201ENST00000549599 178 ntBASIC1.8□□□□□ -2.12
SYNE1Q8NF91 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SYNE1Q8NF91 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RN7SKP161-201ENST00000411110 305 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RPA2P2-201ENST00000419698 796 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 KIF4CP-201ENST00000422742 1279 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 OR7A1P-201ENST00000601206 970 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 Mico1.1-201ENST00000611698 204 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RN7SL326P-201ENST00000477493 296 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RN7SL817P-201ENST00000480777 288 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PRMT5P1-201ENST00000514351 598 ntBASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 DMD-211ENST00000378707 7410 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNE1Q8NF91 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms