Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC116158.1-201ENST00000560231 2129 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 PPBPP2-201ENST00000513150 1362 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 SELENOWP1-201ENST00000322792 252 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RN7SKP77-201ENST00000363261 353 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RNA5SP232-201ENST00000364144 119 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 MIR130B-202ENST00000385018 82 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 PEX12P1-201ENST00000400284 1048 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RPS4XP5-201ENST00000419038 768 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 BMS1P10-201ENST00000443754 1120 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RBMY2AP-201ENST00000445405 1157 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RBMY2CP-201ENST00000448575 1157 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RBMY2DP-202ENST00000448881 1157 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RBMY2BP-202ENST00000451071 1156 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 GEMIN2P1-201ENST00000454246 752 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC021006.1-201ENST00000489849 553 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AL117692.1-201ENST00000494283 713 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC020937.1-201ENST00000519677 1013 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC078899.1-201ENST00000521432 1185 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC136777.2-201ENST00000522979 358 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AL121594.2-201ENST00000541658 472 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 MIR4502-201ENST00000580432 81 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AL359091.2-201ENST00000609303 556 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AC092266.1-201ENST00000610958 165 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AL021918.2-201ENST00000613415 194 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 AL136228.1-201ENST00000622221 319 ntBASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
ZNF439Q8NDP4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
ZNF439Q8NDP4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ZNF439Q8NDP4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ZNF439Q8NDP4 Z95331.1-201ENST00000623075 23112 ntBASIC4.84□□□□□ -1.64
ZNF439Q8NDP4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
ZNF439Q8NDP4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 QRSL1P1-201ENST00000400977 1540 ntBASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 MIR1275-201ENST00000408770 80 ntBASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 MGAT2P2-201ENST00000427194 797 ntBASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 AC096775.1-201ENST00000437724 448 ntBASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZNF439Q8NDP4 AC005077.1-201ENST00000449226 375 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms