Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE4Q8N205 NDUFA5P12-201ENST00000503796 343 ntBASIC7.35□□□□□ -1.23
SYNE4Q8N205 AC118282.1-201ENST00000506408 765 ntBASIC7.35□□□□□ -1.23
SYNE4Q8N205 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.35□□□□□ -1.23
SYNE4Q8N205 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.35□□□□□ -1.23
SYNE4Q8N205 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.35□□□□□ -1.23
SYNE4Q8N205 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE4Q8N205 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE4Q8N205 AC011497.2-201ENST00000600255 639 ntBASIC7.35□□□□□ -1.23
SYNE4Q8N205 AC007204.2-201ENST00000615022 616 ntBASIC7.35□□□□□ -1.23
SYNE4Q8N205 HPVC1-201ENST00000629899 1198 ntBASIC7.35□□□□□ -1.23
SYNE4Q8N205 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE4Q8N205 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.35□□□□□ -1.23
SYNE4Q8N205 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE4Q8N205 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE4Q8N205 AL391262.1-201ENST00000556558 1992 ntBASIC7.35□□□□□ -1.23
SYNE4Q8N205 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.35□□□□□ -1.23
SYNE4Q8N205 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE4Q8N205 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SYNE4Q8N205 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE4Q8N205 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 AC241584.2-201ENST00000637142 2090 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE4Q8N205 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 RN7SKP59-201ENST00000410520 314 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 AL390119.1-201ENST00000440329 312 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 AL513343.1-201ENST00000451818 792 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 RN7SL352P-201ENST00000466002 277 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 RPL23AP40-201ENST00000487630 390 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 AP003117.1-201ENST00000602771 554 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 AL451064.1-201ENST00000607718 471 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 CU639417.4-201ENST00000623928 207 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 AC021766.1-201ENST00000624404 741 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SYNE4Q8N205 AC004808.2-201ENST00000627965 773 ntBASIC7.34□□□□□ -1.23
SYNE4Q8N205 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SYNE4Q8N205 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SYNE4Q8N205 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
SYNE4Q8N205 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.34□□□□□ -1.24
SYNE4Q8N205 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 RNA5SP211-201ENST00000365516 117 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 SFR1P2-201ENST00000421841 730 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 AL356806.1-201ENST00000422524 916 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 AC009120.1-201ENST00000493458 473 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 AC139365.2-201ENST00000517972 253 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 MRPS16P1-201ENST00000523462 412 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 AC091193.1-201ENST00000604640 448 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 BX322635.1-201ENST00000605804 496 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 AC037198.3-201ENST00000616754 526 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 AC106858.1-201ENST00000637497 429 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 AL353763.1-201ENST00000624467 1628 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 MFSD8-219ENST00000641228 2559 ntBASIC7.33□□□□□ -1.24
SYNE4Q8N205 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SYNE4Q8N205 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SYNE4Q8N205 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
SYNE4Q8N205 GTF2IP4-201ENST00000453092 2054 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 AL590763.1-201ENST00000398297 1545 ntBASIC7.32□□□□□ -1.24
SYNE4Q8N205 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SYNE4Q8N205 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms