Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX7Q2KHR2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
RFX7Q2KHR2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFX7Q2KHR2 AC140479.2-201ENST00000421567 3130 ntBASIC7.01□□□□□ -1.29
RFX7Q2KHR2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.01□□□□□ -1.29
RFX7Q2KHR2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX7Q2KHR2 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX7Q2KHR2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFX7Q2KHR2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7□□□□□ -1.29
RFX7Q2KHR2 KYNUP3-201ENST00000574386 1341 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
RFX7Q2KHR2 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
RFX7Q2KHR2 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7□□□□□ -1.29
RFX7Q2KHR2 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7□□□□□ -1.29
RFX7Q2KHR2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 OR2W4P-201ENST00000406496 926 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7□□□□□ -1.29
RFX7Q2KHR2 CRIP1P1-201ENST00000427567 185 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7□□□□□ -1.29
RFX7Q2KHR2 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7□□□□□ -1.29
RFX7Q2KHR2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7□□□□□ -1.29
RFX7Q2KHR2 RNU1-88P-201ENST00000459274 128 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 RN7SL72P-201ENST00000460697 269 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 COPS8P2-201ENST00000473228 627 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 AC074255.1-201ENST00000511259 501 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7□□□□□ -1.29
RFX7Q2KHR2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7□□□□□ -1.29
RFX7Q2KHR2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7□□□□□ -1.29
RFX7Q2KHR2 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 AC060780.2-201ENST00000589047 198 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7□□□□□ -1.29
RFX7Q2KHR2 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 FAM27E4-201ENST00000605259 342 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7□□□□□ -1.29
RFX7Q2KHR2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7□□□□□ -1.29
RFX7Q2KHR2 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 AL034546.1-201ENST00000623740 3693 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RFX7Q2KHR2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7□□□□□ -1.29
RFX7Q2KHR2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
RFX7Q2KHR2 AC117409.1-201ENST00000470499 1310 ntBASIC7□□□□□ -1.29
RFX7Q2KHR2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 OR3A2-201ENST00000408891 1076 ntBASIC6.99□□□□□ -1.29
RFX7Q2KHR2 Z93019.1-201ENST00000416450 973 ntBASIC6.99□□□□□ -1.29
RFX7Q2KHR2 AL662874.1-201ENST00000426065 230 ntBASIC6.99□□□□□ -1.29
RFX7Q2KHR2 RPL12P39-201ENST00000455456 496 ntBASIC6.99□□□□□ -1.29
RFX7Q2KHR2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 AC099521.1-201ENST00000482557 334 ntBASIC6.99□□□□□ -1.29
RFX7Q2KHR2 AC073610.1-201ENST00000489971 396 ntBASIC6.99□□□□□ -1.29
RFX7Q2KHR2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 AL589674.2-201ENST00000604304 337 ntBASIC6.99□□□□□ -1.29
RFX7Q2KHR2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX7Q2KHR2 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 RPL11P3-201ENST00000395256 523 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 OR5W1P-201ENST00000423705 938 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 AL590399.2-201ENST00000427536 309 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 CLUHP1-201ENST00000435012 1190 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 YWHAEP1-201ENST00000453697 763 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 AC022215.1-201ENST00000481770 362 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 MIR1273E-201ENST00000581165 102 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 AL513327.3-201ENST00000602618 469 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 IMMP1LP3-201ENST00000604197 224 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 HIRAP1-201ENST00000605318 787 ntBASIC6.98□□□□□ -1.29
RFX7Q2KHR2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RFX7Q2KHR2 AL133481.2-203ENST00000607558 139 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms