Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXF1Q12946 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXF1Q12946 MIR4260-201ENST00000583107 67 ntBASIC5.24□□□□□ -1.57
FOXF1Q12946 AC015802.2-201ENST00000589690 189 ntBASIC5.24□□□□□ -1.57
FOXF1Q12946 AL513327.3-201ENST00000602618 469 ntBASIC5.24□□□□□ -1.57
FOXF1Q12946 AL360012.1-201ENST00000602813 131 ntBASIC5.24□□□□□ -1.57
FOXF1Q12946 AC100767.2-201ENST00000604840 693 ntBASIC5.24□□□□□ -1.57
FOXF1Q12946 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXF1Q12946 AC022919.1-201ENST00000624979 626 ntBASIC5.24□□□□□ -1.57
FOXF1Q12946 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.24□□□□□ -1.57
FOXF1Q12946 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
FOXF1Q12946 NCOA4P2-201ENST00000340589 1813 ntBASIC5.24□□□□□ -1.57
FOXF1Q12946 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.24□□□□□ -1.57
FOXF1Q12946 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXF1Q12946 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
FOXF1Q12946 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.24□□□□□ -1.57
FOXF1Q12946 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
FOXF1Q12946 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
FOXF1Q12946 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
FOXF1Q12946 NLRP3P1-201ENST00000622303 1785 ntBASIC5.24□□□□□ -1.57
FOXF1Q12946 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
FOXF1Q12946 AC015799.1-201ENST00000622996 3122 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
FOXF1Q12946 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 AC123769.1-201ENST00000530992 3192 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
FOXF1Q12946 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXF1Q12946 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
FOXF1Q12946 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
FOXF1Q12946 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXF1Q12946 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXF1Q12946 AC127526.2-201ENST00000426436 775 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXF1Q12946 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.23□□□□□ -1.57
FOXF1Q12946 GAPDHP48-201ENST00000436626 961 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXF1Q12946 RPL12P39-201ENST00000455456 496 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 CR383656.1-201ENST00000484916 377 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 RPL32P33-201ENST00000487023 394 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 NENFP3-201ENST00000503735 313 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXF1Q12946 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXF1Q12946 AC139365.2-201ENST00000517972 253 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.23□□□□□ -1.57
FOXF1Q12946 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXF1Q12946 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.23□□□□□ -1.57
FOXF1Q12946 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.23□□□□□ -1.57
FOXF1Q12946 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
FOXF1Q12946 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXF1Q12946 AP001267.4-201ENST00000602598 545 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 AL133481.2-203ENST00000607558 139 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 AP005431.1-201ENST00000618479 319 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.23□□□□□ -1.57
FOXF1Q12946 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXF1Q12946 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FOXF1Q12946 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.23□□□□□ -1.57
FOXF1Q12946 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
FOXF1Q12946 AC117409.1-201ENST00000470499 1310 ntBASIC5.23□□□□□ -1.57
FOXF1Q12946 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXF1Q12946 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
FOXF1Q12946 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.22□□□□□ -1.57
FOXF1Q12946 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXF1Q12946 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXF1Q12946 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXF1Q12946 MIR130A-201ENST00000385274 89 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 RNA5SP91-201ENST00000390902 119 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 OR7E101P-201ENST00000400428 513 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 SLC20A1P1-201ENST00000413906 956 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXF1Q12946 VN1R3-201ENST00000418822 919 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXF1Q12946 KRT8P51-201ENST00000438938 274 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXF1Q12946 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.22□□□□□ -1.57
FOXF1Q12946 snoU13.29-201ENST00000459370 104 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 UBFD1P1-201ENST00000473259 814 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FOXF1Q12946 AC022215.1-201ENST00000481770 362 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 SCARNA6.1-201ENST00000516989 238 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 AC079600.1-201ENST00000550326 297 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 AC126615.2-201ENST00000553003 515 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.22□□□□□ -1.57
FOXF1Q12946 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.22□□□□□ -1.57
FOXF1Q12946 AL163952.1-202ENST00000569625 600 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.22□□□□□ -1.57
FOXF1Q12946 AC027243.2-201ENST00000602530 724 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 AC093388.1-201ENST00000609166 430 ntBASIC5.22□□□□□ -1.57
FOXF1Q12946 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
FOXF1Q12946 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
FOXF1Q12946 AL049634.1-201ENST00000453770 1720 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms