Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.77□□□□□ -1.33
GABPAQ06546 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.77□□□□□ -1.33
GABPAQ06546 AL390119.1-201ENST00000440329 312 ntBASIC6.77□□□□□ -1.33
GABPAQ06546 SLC25A51P1-201ENST00000468432 871 ntBASIC6.77□□□□□ -1.33
GABPAQ06546 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.77□□□□□ -1.33
GABPAQ06546 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.77□□□□□ -1.33
GABPAQ06546 AC105384.2-201ENST00000508433 640 ntBASIC6.77□□□□□ -1.33
GABPAQ06546 AC109481.1-201ENST00000509173 282 ntBASIC6.77□□□□□ -1.33
GABPAQ06546 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.77□□□□□ -1.33
GABPAQ06546 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.77□□□□□ -1.33
GABPAQ06546 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.77□□□□□ -1.33
GABPAQ06546 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.77□□□□□ -1.33
GABPAQ06546 AL121594.2-201ENST00000541658 472 ntBASIC6.77□□□□□ -1.33
GABPAQ06546 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.77□□□□□ -1.33
GABPAQ06546 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
GABPAQ06546 AL031123.3-201ENST00000623345 1837 ntBASIC6.77□□□□□ -1.33
GABPAQ06546 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
GABPAQ06546 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
GABPAQ06546 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
GABPAQ06546 AC114786.1-201ENST00000512892 1415 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.76□□□□□ -1.33
GABPAQ06546 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.76□□□□□ -1.33
GABPAQ06546 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
GABPAQ06546 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
GABPAQ06546 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.76□□□□□ -1.33
GABPAQ06546 AL049634.1-201ENST00000453770 1720 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.76□□□□□ -1.33
GABPAQ06546 CR788268.1-201ENST00000603931 1809 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
GABPAQ06546 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
GABPAQ06546 LINC01963-201ENST00000562038 3148 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 RNU6-673P-201ENST00000365084 104 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.76□□□□□ -1.33
GABPAQ06546 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.76□□□□□ -1.33
GABPAQ06546 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 TNPO1P1-201ENST00000423641 1138 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.76□□□□□ -1.33
GABPAQ06546 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.76□□□□□ -1.33
GABPAQ06546 RN7SL214P-201ENST00000487317 265 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.76□□□□□ -1.33
GABPAQ06546 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.76□□□□□ -1.33
GABPAQ06546 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.76□□□□□ -1.33
GABPAQ06546 AC007204.2-201ENST00000615022 616 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 HSPD1P8-201ENST00000400121 1658 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.76□□□□□ -1.33
GABPAQ06546 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.76□□□□□ -1.33
GABPAQ06546 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
GABPAQ06546 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
GABPAQ06546 AC005725.1-201ENST00000577346 2607 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
GABPAQ06546 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
GABPAQ06546 RARSP1-201ENST00000542842 1418 ntBASIC6.76□□□□□ -1.33
GABPAQ06546 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
GABPAQ06546 DNM1P47-203ENST00000571780 12667 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
GABPAQ06546 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
GABPAQ06546 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
GABPAQ06546 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
GABPAQ06546 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
GABPAQ06546 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
GABPAQ06546 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
GABPAQ06546 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.75□□□□□ -1.33
GABPAQ06546 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
GABPAQ06546 RN7SKP162-201ENST00000363605 345 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 MIR130A-201ENST00000385274 89 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 BMS1P13-201ENST00000417301 885 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.75□□□□□ -1.33
GABPAQ06546 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.75□□□□□ -1.33
GABPAQ06546 AL365220.1-201ENST00000432923 399 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 OR7E116P-201ENST00000448529 957 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 AL450023.1-201ENST00000450868 751 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.75□□□□□ -1.33
GABPAQ06546 AC087672.1-201ENST00000479876 766 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 RN7SL184P-201ENST00000488308 297 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 TRBV5-2-201ENST00000489095 273 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.75□□□□□ -1.33
GABPAQ06546 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.75□□□□□ -1.33
GABPAQ06546 AC078899.1-201ENST00000521432 1185 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.75□□□□□ -1.33
GABPAQ06546 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.75□□□□□ -1.33
GABPAQ06546 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.75□□□□□ -1.33
GABPAQ06546 AP000864.1-201ENST00000609424 650 ntBASIC6.75□□□□□ -1.33
GABPAQ06546 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.75□□□□□ -1.33
GABPAQ06546 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
GABPAQ06546 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
GABPAQ06546 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
GABPAQ06546 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
GABPAQ06546 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
GABPAQ06546 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.74□□□□□ -1.33
GABPAQ06546 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.74□□□□□ -1.33
GABPAQ06546 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.74□□□□□ -1.33
GABPAQ06546 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
GABPAQ06546 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
GABPAQ06546 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms