Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC090607.5-201ENST00000615692 224 ntBASIC3.39□□□□□ -1.87
HSPG2P98160 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HSPG2P98160 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HSPG2P98160 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC3.39□□□□□ -1.87
HSPG2P98160 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HSPG2P98160 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC3.38□□□□□ -1.87
HSPG2P98160 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HSPG2P98160 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC3.38□□□□□ -1.87
HSPG2P98160 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HSPG2P98160 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.38□□□□□ -1.87
HSPG2P98160 AL078621.3-201ENST00000623707 2042 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
HSPG2P98160 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.38□□□□□ -1.87
HSPG2P98160 FTH1P8-201ENST00000498161 514 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.38□□□□□ -1.87
HSPG2P98160 AP000769.2-201ENST00000602344 396 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.38□□□□□ -1.87
HSPG2P98160 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HSPG2P98160 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC3.38□□□□□ -1.87
HSPG2P98160 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.38□□□□□ -1.87
HSPG2P98160 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HSPG2P98160 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HSPG2P98160 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.38□□□□□ -1.87
HSPG2P98160 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC3.38□□□□□ -1.87
HSPG2P98160 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC3.38□□□□□ -1.87
HSPG2P98160 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC3.38□□□□□ -1.87
HSPG2P98160 AC013488.1-201ENST00000526618 1838 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC3.38□□□□□ -1.87
HSPG2P98160 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC3.38□□□□□ -1.87
HSPG2P98160 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HSPG2P98160 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC3.38□□□□□ -1.87
HSPG2P98160 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 AP005403.1-201ENST00000579720 229 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 AC060766.1-201ENST00000590824 627 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 AC067931.1-201ENST00000624190 671 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.38□□□□□ -1.87
HSPG2P98160 OR8B1P-202ENST00000641132 1178 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 SPATA31D5P-201ENST00000376459 4784 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC3.38□□□□□ -1.87
HSPG2P98160 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HSPG2P98160 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HSPG2P98160 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC3.38□□□□□ -1.87
HSPG2P98160 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC3.38□□□□□ -1.87
HSPG2P98160 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 MIR208A-201ENST00000362287 71 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 AC015977.1-201ENST00000418887 292 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 BZW1P1-201ENST00000454901 1240 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 AC063943.1-201ENST00000465434 453 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.37□□□□□ -1.87
HSPG2P98160 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.37□□□□□ -1.87
HSPG2P98160 RN7SKP92-201ENST00000517266 244 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 IGHVIII-76-1-201ENST00000523776 286 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC3.37□□□□□ -1.87
HSPG2P98160 CCDC58P3-201ENST00000590792 430 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 AC095055.1-201ENST00000603472 1113 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.37□□□□□ -1.87
HSPG2P98160 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 AC011369.2-201ENST00000624423 1567 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HSPG2P98160 RNA5SP171-201ENST00000391071 115 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HSPG2P98160 RNA5SP44-201ENST00000410446 133 ntBASIC3.37□□□□□ -1.87
HSPG2P98160 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.37□□□□□ -1.87
HSPG2P98160 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms