Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX6-1P78426 MTND1P31-201ENST00000449206 961 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.95□□□□□ -1.46
NKX6-1P78426 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX6-1P78426 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX6-1P78426 CCNJP2-201ENST00000457810 1163 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 MTCO2P6-201ENST00000463134 685 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 AC073610.1-201ENST00000489971 396 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 RPS27P20-201ENST00000492051 246 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 RPL21P131-201ENST00000497298 483 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 PABPC1P1-201ENST00000506347 591 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 GUSBP9-201ENST00000510138 584 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX6-1P78426 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 RNA5SP278-201ENST00000517055 102 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 RNU6-1028P-201ENST00000517164 93 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 AC079064.1-201ENST00000528365 362 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 MTND3P12-201ENST00000559068 328 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.95□□□□□ -1.46
NKX6-1P78426 RN7SL622P-201ENST00000585292 275 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX6-1P78426 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX6-1P78426 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.95□□□□□ -1.46
NKX6-1P78426 ELOCP35-201ENST00000604289 336 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX6-1P78426 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX6-1P78426 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NKX6-1P78426 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 AC027559.1-201ENST00000636288 271 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX6-1P78426 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
NKX6-1P78426 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX6-1P78426 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.95□□□□□ -1.46
NKX6-1P78426 UGT2B26P-201ENST00000508672 1613 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 ASNSP6-201ENST00000592770 1618 ntBASIC5.95□□□□□ -1.46
NKX6-1P78426 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX6-1P78426 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
NKX6-1P78426 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX6-1P78426 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX6-1P78426 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
NKX6-1P78426 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX6-1P78426 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX6-1P78426 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NKX6-1P78426 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NKX6-1P78426 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NKX6-1P78426 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NKX6-1P78426 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
NKX6-1P78426 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX6-1P78426 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX6-1P78426 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NKX6-1P78426 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NKX6-1P78426 RNU6-236P-201ENST00000363886 106 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NKX6-1P78426 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NKX6-1P78426 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 PPIAP26-201ENST00000377951 522 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 RNU6-906P-201ENST00000384700 70 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 LINC01347-201ENST00000417964 355 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX6-1P78426 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX6-1P78426 AC092634.2-201ENST00000428146 1010 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NKX6-1P78426 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX6-1P78426 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX6-1P78426 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 AC144530.1-201ENST00000452862 555 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 RPL7P45-201ENST00000455851 743 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 RPL7P32-201ENST00000457119 744 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 AC115223.1-201ENST00000466377 870 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 RPS3AP49-201ENST00000472161 790 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX6-1P78426 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX6-1P78426 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.94□□□□□ -1.46
NKX6-1P78426 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX6-1P78426 BOLA3P3-201ENST00000505182 232 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX6-1P78426 HPRT1P1-201ENST00000509498 657 ntBASIC5.94□□□□□ -1.46
NKX6-1P78426 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX6-1P78426 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms