Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNU1-88P-201ENST00000459274 128 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 AC068228.1-201ENST00000461723 211 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 AC117409.1-201ENST00000470499 1310 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AL122020.1-201ENST00000472287 459 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AC122718.2-201ENST00000505325 591 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 SETP21-201ENST00000514799 892 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HIST1H3AP68431 RN7SKP238-201ENST00000516483 249 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AL356801.1-201ENST00000559320 294 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 LINC00556-201ENST00000569603 412 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 MIR4776-2-201ENST00000580204 80 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 MIR4433B-201ENST00000581329 102 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 AC022400.9-201ENST00000623633 273 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 AP001052.1-201ENST00000626421 99 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 OR11H2-202ENST00000641517 1085 ntBASIC5.1□□□□□ -1.59
HIST1H3AP68431 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
HIST1H3AP68431 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H3AP68431 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H3AP68431 RNA5SP91-201ENST00000390902 119 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 PEX12P1-201ENST00000400284 1048 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 TRGV5P-201ENST00000419915 354 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 VN1R21P-201ENST00000426703 765 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 DEFA9P-201ENST00000433042 285 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 EIF5AP4-201ENST00000441206 465 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 Z83838.1-202ENST00000456225 839 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC099521.1-201ENST00000482557 334 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC105384.2-201ENST00000508433 640 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 CYCSP38-201ENST00000559840 322 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC002310.3-201ENST00000569728 723 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC025857.2-201ENST00000602711 238 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 RPL12P48-201ENST00000605620 304 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H3AP68431 AC000095.2-202ENST00000637415 154 ntBASIC5.09□□□□□ -1.59
HIST1H3AP68431 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H3AP68431 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HIST1H3AP68431 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
HIST1H3AP68431 AC005005.4-201ENST00000623789 16698 ntBASIC5.09□□□□□ -1.6
HIST1H3AP68431 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
HIST1H3AP68431 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
HIST1H3AP68431 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 LYARP1-201ENST00000436977 1501 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 PARP4P2-201ENST00000446672 3326 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC092451.3-201ENST00000625067 1343 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 RNU1-65P-201ENST00000363919 148 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 BX119904.3-201ENST00000428194 957 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 CTSLP6-201ENST00000458273 1002 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 EIF4E2P2-201ENST00000492033 736 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 GAPDHP71-201ENST00000511530 1003 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 WBP1LP3-201ENST00000523033 208 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 AP000648.1-201ENST00000529682 397 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 PCNAP4-201ENST00000532690 730 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms