Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.45□□□□□ -1.38
VCPP55072 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.45□□□□□ -1.38
VCPP55072 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.45□□□□□ -1.38
VCPP55072 OR6M2P-201ENST00000529831 871 ntBASIC6.45□□□□□ -1.38
VCPP55072 HIGD1AP5-201ENST00000529959 259 ntBASIC6.45□□□□□ -1.38
VCPP55072 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.45□□□□□ -1.38
VCPP55072 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.45□□□□□ -1.38
VCPP55072 HMGN2P47-201ENST00000559378 272 ntBASIC6.45□□□□□ -1.38
VCPP55072 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.45□□□□□ -1.38
VCPP55072 ZNF322P1-201ENST00000568013 1209 ntBASIC6.45□□□□□ -1.38
VCPP55072 AC023389.2-201ENST00000580031 955 ntBASIC6.45□□□□□ -1.38
VCPP55072 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.45□□□□□ -1.38
VCPP55072 AC090236.2-201ENST00000587933 1101 ntBASIC6.45□□□□□ -1.38
VCPP55072 AC010998.3-201ENST00000613871 631 ntBASIC6.45□□□□□ -1.38
VCPP55072 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
VCPP55072 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VCPP55072 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VCPP55072 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VCPP55072 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VCPP55072 AL121768.1-201ENST00000613917 2544 ntBASIC6.45□□□□□ -1.38
VCPP55072 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.45□□□□□ -1.38
VCPP55072 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
VCPP55072 OR13C1P-202ENST00000641378 2919 ntBASIC6.45□□□□□ -1.38
VCPP55072 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.44□□□□□ -1.38
VCPP55072 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
VCPP55072 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.44□□□□□ -1.38
VCPP55072 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VCPP55072 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VCPP55072 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
VCPP55072 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VCPP55072 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VCPP55072 RN7SKP115-201ENST00000363177 317 ntBASIC6.44□□□□□ -1.38
VCPP55072 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.44□□□□□ -1.38
VCPP55072 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
VCPP55072 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
VCPP55072 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.44□□□□□ -1.38
VCPP55072 RPL23AP17-201ENST00000401064 499 ntBASIC6.44□□□□□ -1.38
VCPP55072 RPS26P38-201ENST00000414476 348 ntBASIC6.44□□□□□ -1.38
VCPP55072 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.44□□□□□ -1.38
VCPP55072 AL035660.1-201ENST00000422041 222 ntBASIC6.44□□□□□ -1.38
VCPP55072 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.44□□□□□ -1.38
VCPP55072 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
VCPP55072 AC006455.6-201ENST00000426192 893 ntBASIC6.44□□□□□ -1.38
VCPP55072 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.44□□□□□ -1.38
VCPP55072 H2AFZP6-201ENST00000444403 394 ntBASIC6.44□□□□□ -1.38
VCPP55072 OTX2P1-201ENST00000450956 354 ntBASIC6.44□□□□□ -1.38
VCPP55072 AC112187.1-201ENST00000455837 479 ntBASIC6.44□□□□□ -1.38
VCPP55072 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.44□□□□□ -1.38
VCPP55072 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VCPP55072 AP001858.2-201ENST00000536213 601 ntBASIC6.44□□□□□ -1.38
VCPP55072 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.44□□□□□ -1.38
VCPP55072 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.44□□□□□ -1.38
VCPP55072 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.44□□□□□ -1.38
VCPP55072 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.44□□□□□ -1.38
VCPP55072 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.44□□□□□ -1.38
VCPP55072 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.44□□□□□ -1.38
VCPP55072 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.44□□□□□ -1.38
VCPP55072 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.44□□□□□ -1.38
VCPP55072 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VCPP55072 ZNF101P1-201ENST00000435701 1720 ntBASIC6.44□□□□□ -1.38
VCPP55072 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.44□□□□□ -1.38
VCPP55072 AC117409.1-201ENST00000470499 1310 ntBASIC6.44□□□□□ -1.38
VCPP55072 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VCPP55072 AF287957.1-201ENST00000607368 1595 ntBASIC6.44□□□□□ -1.38
VCPP55072 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VCPP55072 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VCPP55072 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.43□□□□□ -1.38
VCPP55072 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
VCPP55072 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VCPP55072 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.43□□□□□ -1.38
VCPP55072 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VCPP55072 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
VCPP55072 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VCPP55072 RNU1-134P-201ENST00000362935 165 ntBASIC6.43□□□□□ -1.38
VCPP55072 RNU1-49P-201ENST00000363468 159 ntBASIC6.43□□□□□ -1.38
VCPP55072 RNU6-171P-201ENST00000384354 107 ntBASIC6.43□□□□□ -1.38
VCPP55072 AC010740.1-201ENST00000417035 684 ntBASIC6.43□□□□□ -1.38
VCPP55072 AC002553.3-201ENST00000453002 341 ntBASIC6.43□□□□□ -1.38
VCPP55072 AC073594.1-201ENST00000462065 364 ntBASIC6.43□□□□□ -1.38
VCPP55072 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.43□□□□□ -1.38
VCPP55072 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.43□□□□□ -1.38
VCPP55072 CYP4F27P-201ENST00000514557 494 ntBASIC6.43□□□□□ -1.38
VCPP55072 CR383658.1-201ENST00000514609 734 ntBASIC6.43□□□□□ -1.38
VCPP55072 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.43□□□□□ -1.38
VCPP55072 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.43□□□□□ -1.38
VCPP55072 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VCPP55072 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.43□□□□□ -1.38
VCPP55072 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.43□□□□□ -1.38
VCPP55072 MIR1269B-201ENST00000580405 75 ntBASIC6.43□□□□□ -1.38
VCPP55072 AP001823.1-201ENST00000604056 1003 ntBASIC6.43□□□□□ -1.38
VCPP55072 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.43□□□□□ -1.38
VCPP55072 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.43□□□□□ -1.38
VCPP55072 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.43□□□□□ -1.38
VCPP55072 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.43□□□□□ -1.38
VCPP55072 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.43□□□□□ -1.38
VCPP55072 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.43□□□□□ -1.38
VCPP55072 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
VCPP55072 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VCPP55072 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
VCPP55072 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms