Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.95□□□□□ -1.46
NR1H2P55055 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NR1H2P55055 AL356986.1-201ENST00000604085 341 ntBASIC5.95□□□□□ -1.46
NR1H2P55055 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NR1H2P55055 AC005514.1-201ENST00000623521 208 ntBASIC5.95□□□□□ -1.46
NR1H2P55055 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.95□□□□□ -1.46
NR1H2P55055 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
NR1H2P55055 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.95□□□□□ -1.46
NR1H2P55055 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NR1H2P55055 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.95□□□□□ -1.46
NR1H2P55055 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NR1H2P55055 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NR1H2P55055 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NR1H2P55055 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
NR1H2P55055 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.95□□□□□ -1.46
NR1H2P55055 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.95□□□□□ -1.46
NR1H2P55055 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.95□□□□□ -1.46
NR1H2P55055 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NR1H2P55055 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NR1H2P55055 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 MTCO1P7-201ENST00000419523 1542 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AC068446.1-201ENST00000556425 1549 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 AP005432.1-201ENST00000580891 3485 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NR1H2P55055 MT-RNR2-201ENST00000387347 1559 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 RAD1P1-201ENST00000231383 813 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NR1H2P55055 RN7SKP250-201ENST00000363924 321 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 SNORA64.3-201ENST00000365647 134 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.94□□□□□ -1.46
NR1H2P55055 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.94□□□□□ -1.46
NR1H2P55055 UBBP1-201ENST00000392399 473 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 FDPSP5-201ENST00000399474 1057 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AL356057.1-202ENST00000402263 756 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 RN7SKP151-201ENST00000410230 316 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC023141.6-201ENST00000429418 337 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 BX276092.6-201ENST00000430476 250 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 MED28P4-201ENST00000433137 572 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AC093716.1-201ENST00000435923 377 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AC092106.2-201ENST00000436597 487 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 PA2G4P6-201ENST00000438325 1197 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AC074367.1-201ENST00000438685 1125 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 KRT8P51-201ENST00000438938 274 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 MTCYBP12-201ENST00000440559 1134 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AL353898.1-201ENST00000444055 238 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AL157827.1-201ENST00000447622 132 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 CALM1P2-201ENST00000452941 448 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 BX276092.8-201ENST00000455722 250 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 RBMY2HP-201ENST00000457961 720 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 RPS3AP49-201ENST00000472161 790 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC021146.11-201ENST00000503319 491 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC008628.1-201ENST00000508663 265 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 SNX18P23-201ENST00000510867 677 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.94□□□□□ -1.46
NR1H2P55055 SETP17-201ENST00000534163 817 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.94□□□□□ -1.46
NR1H2P55055 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC107958.1-201ENST00000556576 290 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AC027176.2-201ENST00000559166 746 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.94□□□□□ -1.46
NR1H2P55055 MTND4LP25-201ENST00000570218 163 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AC005242.1-201ENST00000585658 438 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 AL355802.4-201ENST00000607635 548 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AC020978.9-201ENST00000624380 1141 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 AC022325.1-201ENST00000502748 2199 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 AC068870.3-201ENST00000625077 2536 ntBASIC5.94□□□□□ -1.46
NR1H2P55055 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.94□□□□□ -1.46
NR1H2P55055 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NR1H2P55055 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms