Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 KATNBL1P4-201ENST00000503545 918 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.76□□□□□ -1.33
NEDD4P46934 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.76□□□□□ -1.33
NEDD4P46934 MIR4420-201ENST00000583944 77 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 AC063977.5-201ENST00000601044 974 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 AC025857.2-201ENST00000602711 238 ntBASIC6.76□□□□□ -1.33
NEDD4P46934 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.76□□□□□ -1.33
NEDD4P46934 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD4P46934 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD4P46934 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD4P46934 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD4P46934 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD4P46934 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD4P46934 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD4P46934 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.75□□□□□ -1.33
NEDD4P46934 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD4P46934 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
NEDD4P46934 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.75□□□□□ -1.33
NEDD4P46934 MSL3P1-202ENST00000440028 1468 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 TMSB4XP4-201ENST00000323496 618 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD4P46934 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.75□□□□□ -1.33
NEDD4P46934 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.75□□□□□ -1.33
NEDD4P46934 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD4P46934 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD4P46934 HSPE1P27-201ENST00000430808 296 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.75□□□□□ -1.33
NEDD4P46934 AC242426.1-201ENST00000435270 960 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 AC064862.4-201ENST00000442180 334 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.75□□□□□ -1.33
NEDD4P46934 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
NEDD4P46934 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
NEDD4P46934 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEDD4P46934 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD4P46934 RN7SL570P-201ENST00000484405 292 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 OR7E157P-201ENST00000494376 911 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 IGKV3D-34-201ENST00000522638 302 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 AC139697.1-201ENST00000548429 745 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 AC010547.6-201ENST00000571789 193 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 AC020978.7-201ENST00000575953 1187 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD4P46934 AC009237.12-201ENST00000604755 742 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 AL133481.2-203ENST00000607558 139 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 RNA5SP440-201ENST00000612665 119 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD4P46934 AL035661.1-201ENST00000620459 1144 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.75□□□□□ -1.33
NEDD4P46934 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD4P46934 AC000095.2-202ENST00000637415 154 ntBASIC6.75□□□□□ -1.33
NEDD4P46934 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.75□□□□□ -1.33
NEDD4P46934 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.74□□□□□ -1.33
NEDD4P46934 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEDD4P46934 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.74□□□□□ -1.33
NEDD4P46934 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
NEDD4P46934 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEDD4P46934 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.74□□□□□ -1.33
NEDD4P46934 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
NEDD4P46934 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEDD4P46934 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.74□□□□□ -1.33
NEDD4P46934 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.74□□□□□ -1.33
NEDD4P46934 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.74□□□□□ -1.33
NEDD4P46934 AC093719.1-201ENST00000480427 441 ntBASIC6.74□□□□□ -1.33
NEDD4P46934 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.74□□□□□ -1.33
NEDD4P46934 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.74□□□□□ -1.33
NEDD4P46934 RNU6-615P-201ENST00000516065 106 ntBASIC6.74□□□□□ -1.33
NEDD4P46934 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.74□□□□□ -1.33
NEDD4P46934 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.74□□□□□ -1.33
NEDD4P46934 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.74□□□□□ -1.33
NEDD4P46934 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.74□□□□□ -1.33
NEDD4P46934 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NEDD4P46934 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NEDD4P46934 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.74□□□□□ -1.33
NEDD4P46934 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEDD4P46934 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEDD4P46934 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NEDD4P46934 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
NEDD4P46934 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEDD4P46934 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.73□□□□□ -1.33
NEDD4P46934 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.73□□□□□ -1.33
NEDD4P46934 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.73□□□□□ -1.33
NEDD4P46934 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.73□□□□□ -1.33
NEDD4P46934 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEDD4P46934 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEDD4P46934 AC092646.2-201ENST00000431242 2095 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
NEDD4P46934 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEDD4P46934 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.73□□□□□ -1.33
NEDD4P46934 RN7SKP279-201ENST00000411383 298 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 RPS6P23-201ENST00000413224 722 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 AL161636.2-201ENST00000445179 927 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 EEF1B2P6-201ENST00000445713 673 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEDD4P46934 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEDD4P46934 SETP20-201ENST00000457046 852 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 RN7SL72P-201ENST00000460697 269 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 RN7SL273P-201ENST00000481561 299 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEDD4P46934 UGT2A3P7-201ENST00000510485 734 ntBASIC6.73□□□□□ -1.33
NEDD4P46934 AC074255.1-201ENST00000511259 501 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms