Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMBP28068 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DMBP28068 AL078595.2-201ENST00000605309 1780 ntBASIC4.48□□□□□ -1.69
HLA-DMBP28068 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 PSG10P-201ENST00000501199 1500 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 HSPD1P9-201ENST00000420325 1636 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 COX6B1P3-201ENST00000312310 260 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 RNA5SP211-201ENST00000365516 117 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 VN1R3-201ENST00000418822 919 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 TRGV5P-201ENST00000419915 354 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 RPL12P11-201ENST00000439970 501 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 RSU1P1-201ENST00000453416 441 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC083795.1-201ENST00000491760 320 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC008629.2-201ENST00000503783 483 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 MIR2117-201ENST00000516780 80 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC136777.2-201ENST00000522979 358 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC007346.1-201ENST00000569208 867 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 AL021918.2-201ENST00000613415 194 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 MIR1910-201ENST00000636955 80 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 RBMY1HP-201ENST00000382759 1389 ntBASIC4.47□□□□□ -1.69
HLA-DMBP28068 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DMBP28068 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
HLA-DMBP28068 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DMBP28068 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.46□□□□□ -1.69
HLA-DMBP28068 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
HLA-DMBP28068 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DMBP28068 AC093225.1-201ENST00000506867 1408 ntBASIC4.46□□□□□ -1.69
HLA-DMBP28068 LYARP1-201ENST00000436977 1501 ntBASIC4.46□□□□□ -1.69
HLA-DMBP28068 MTCO1P28-201ENST00000574177 1528 ntBASIC4.46□□□□□ -1.69
HLA-DMBP28068 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DMBP28068 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DMBP28068 AL137141.1-201ENST00000624622 4836 ntBASIC4.46□□□□□ -1.69
HLA-DMBP28068 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DMBP28068 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC005005.4-201ENST00000623789 16698 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 RN7SKP128-201ENST00000364270 303 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC004386.1-201ENST00000393214 761 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC099677.3-201ENST00000427081 395 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DMBP28068 EIF5AP4-201ENST00000441206 465 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 HMGN1P2-201ENST00000445197 310 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 RBMY2AP-201ENST00000445405 1157 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 RBMY2CP-201ENST00000448575 1157 ntBASIC4.46□□□□□ -1.7
HLA-DMBP28068 RBMY2DP-202ENST00000448881 1157 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms