Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.81□□□□□ -1.32
POLR2AP24928 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.81□□□□□ -1.32
POLR2AP24928 AP000676.2-201ENST00000529711 301 ntBASIC6.81□□□□□ -1.32
POLR2AP24928 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
POLR2AP24928 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.81□□□□□ -1.32
POLR2AP24928 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC6.81□□□□□ -1.32
POLR2AP24928 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.81□□□□□ -1.32
POLR2AP24928 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
POLR2AP24928 AC104447.1-201ENST00000624214 2124 ntBASIC6.81□□□□□ -1.32
POLR2AP24928 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.81□□□□□ -1.32
POLR2AP24928 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
POLR2AP24928 Y_RNA.110-201ENST00000363220 99 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.8□□□□□ -1.32
POLR2AP24928 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.8□□□□□ -1.32
POLR2AP24928 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.8□□□□□ -1.32
POLR2AP24928 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.8□□□□□ -1.32
POLR2AP24928 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.8□□□□□ -1.32
POLR2AP24928 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.8□□□□□ -1.32
POLR2AP24928 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.8□□□□□ -1.32
POLR2AP24928 RN7SKP253-201ENST00000516424 309 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.8□□□□□ -1.32
POLR2AP24928 OR1F2P-201ENST00000570470 933 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.8□□□□□ -1.32
POLR2AP24928 MIR4260-201ENST00000583107 67 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.8□□□□□ -1.32
POLR2AP24928 BNIP3P38-201ENST00000601117 544 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC110792.4-201ENST00000609843 298 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC084824.5-201ENST00000612009 413 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC091046.2-201ENST00000620775 665 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC112255.1-201ENST00000624070 2493 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC004777.1-201ENST00000624317 287 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.8□□□□□ -1.32
POLR2AP24928 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
POLR2AP24928 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
POLR2AP24928 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
POLR2AP24928 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.8□□□□□ -1.32
POLR2AP24928 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.8□□□□□ -1.32
POLR2AP24928 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.8□□□□□ -1.32
POLR2AP24928 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 MIR133B-201ENST00000362210 119 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 RNA5SP211-201ENST00000365516 117 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 MIR141-201ENST00000384975 95 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 RPS26P13-201ENST00000419030 330 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.8□□□□□ -1.32
POLR2AP24928 RPS11P7-201ENST00000442125 465 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AL022237.1-201ENST00000446663 358 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AL389915.2-201ENST00000454576 441 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 RN7SL570P-201ENST00000484405 292 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 AC098862.1-201ENST00000504991 413 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.8□□□□□ -1.32
POLR2AP24928 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
POLR2AP24928 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.8□□□□□ -1.32
POLR2AP24928 AL049840.6-202ENST00000603373 279 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC087763.1-201ENST00000603391 286 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AC008115.3-201ENST00000614874 549 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 HPVC1-201ENST00000629899 1198 ntBASIC6.8□□□□□ -1.32
POLR2AP24928 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
POLR2AP24928 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
POLR2AP24928 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
POLR2AP24928 SALL4P7-201ENST00000555779 3120 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 AL731556.1-201ENST00000394628 3711 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
POLR2AP24928 AL136116.2-201ENST00000404020 785 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 RSL24D1P1-201ENST00000404972 493 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.79□□□□□ -1.32
POLR2AP24928 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.79□□□□□ -1.32
POLR2AP24928 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 AC096775.1-201ENST00000437724 448 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 HIGD1AP8-201ENST00000453927 274 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.79□□□□□ -1.32
POLR2AP24928 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.79□□□□□ -1.32
POLR2AP24928 OR4A40P-201ENST00000533878 948 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.79□□□□□ -1.32
POLR2AP24928 AC098483.2-201ENST00000603158 454 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.79□□□□□ -1.32
POLR2AP24928 AC107905.1-201ENST00000616204 426 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 AL391597.1-201ENST00000618707 694 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 PARP4P1-201ENST00000435945 2337 ntBASIC6.79□□□□□ -1.32
POLR2AP24928 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.79□□□□□ -1.32
POLR2AP24928 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.79□□□□□ -1.32
POLR2AP24928 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
POLR2AP24928 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.79□□□□□ -1.32
POLR2AP24928 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms