Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
XRCC1P18887 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
XRCC1P18887 AC005224.3-201ENST00000584683 2140 ntBASIC5.86□□□□□ -1.47
XRCC1P18887 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.85□□□□□ -1.47
XRCC1P18887 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 AC099654.3-201ENST00000447087 1546 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
XRCC1P18887 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.85□□□□□ -1.47
XRCC1P18887 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
XRCC1P18887 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
XRCC1P18887 RNA5SP453-201ENST00000362503 119 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.85□□□□□ -1.47
XRCC1P18887 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.85□□□□□ -1.47
XRCC1P18887 NDUFS5P5-201ENST00000437256 321 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.85□□□□□ -1.47
XRCC1P18887 AL358876.1-201ENST00000453364 1075 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 HLA-DPA3-207ENST00000454398 229 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.85□□□□□ -1.47
XRCC1P18887 SNRPCP3-201ENST00000474888 476 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.85□□□□□ -1.47
XRCC1P18887 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.85□□□□□ -1.47
XRCC1P18887 UGT2A3P7-201ENST00000510485 734 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.85□□□□□ -1.47
XRCC1P18887 AC006499.4-201ENST00000510947 694 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 TPM3P3-201ENST00000521343 354 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.85□□□□□ -1.47
XRCC1P18887 AC068305.2-201ENST00000550567 1205 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.85□□□□□ -1.47
XRCC1P18887 HMGN2P47-201ENST00000559378 272 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.85□□□□□ -1.47
XRCC1P18887 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.85□□□□□ -1.47
XRCC1P18887 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.85□□□□□ -1.47
XRCC1P18887 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.85□□□□□ -1.47
XRCC1P18887 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 AC139426.3-201ENST00000605648 2059 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.85□□□□□ -1.47
XRCC1P18887 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
XRCC1P18887 AC016583.1-201ENST00000624221 2431 ntBASIC5.85□□□□□ -1.47
XRCC1P18887 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
XRCC1P18887 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.84□□□□□ -1.47
XRCC1P18887 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
XRCC1P18887 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.84□□□□□ -1.47
XRCC1P18887 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
XRCC1P18887 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
XRCC1P18887 AC027088.4-201ENST00000611559 1947 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.84□□□□□ -1.47
XRCC1P18887 OR10R3P-201ENST00000361688 942 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
XRCC1P18887 MIR1203-201ENST00000408812 85 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 RN7SKP166-201ENST00000410812 305 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.84□□□□□ -1.47
XRCC1P18887 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.84□□□□□ -1.47
XRCC1P18887 NMD3P2-201ENST00000421815 761 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 IPPKP1-201ENST00000422501 768 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 KIF4CP-201ENST00000422742 1279 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 OR5W1P-201ENST00000423705 938 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
XRCC1P18887 RPS29P14-201ENST00000431518 171 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.84□□□□□ -1.47
XRCC1P18887 BMS1P10-201ENST00000443754 1120 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.84□□□□□ -1.47
XRCC1P18887 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
XRCC1P18887 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
XRCC1P18887 AC097486.1-201ENST00000515331 210 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 snoU109.5-201ENST00000516231 132 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.84□□□□□ -1.47
XRCC1P18887 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.84□□□□□ -1.47
XRCC1P18887 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.84□□□□□ -1.47
XRCC1P18887 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
XRCC1P18887 MIR4776-2-201ENST00000580204 80 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 AC100767.2-201ENST00000604840 693 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 SNX18P12-201ENST00000624821 759 ntBASIC5.84□□□□□ -1.47
XRCC1P18887 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.84□□□□□ -1.47
XRCC1P18887 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.84□□□□□ -1.47
XRCC1P18887 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
XRCC1P18887 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
XRCC1P18887 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
XRCC1P18887 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.48
XRCC1P18887 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
XRCC1P18887 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.83□□□□□ -1.48
XRCC1P18887 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.83□□□□□ -1.48
XRCC1P18887 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
XRCC1P18887 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.83□□□□□ -1.48
XRCC1P18887 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms