Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SNORD16-201ENST00000362803 99 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 RNU6-906P-201ENST00000384700 70 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 AL050335.1-201ENST00000396909 869 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN1P18031 AC099535.1-201ENST00000408928 371 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN1P18031 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN1P18031 OSTCP4-201ENST00000424397 449 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 AL139158.1-201ENST00000424719 340 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 TXNL1P1-201ENST00000429528 554 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 RPS7P2-201ENST00000435134 607 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN1P18031 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.81□□□□□ -1.32
PTPN1P18031 TIMM8BP2-201ENST00000445940 251 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN1P18031 EEF1B2P3-201ENST00000447718 678 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN1P18031 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.81□□□□□ -1.32
PTPN1P18031 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN1P18031 RN7SL552P-201ENST00000462094 276 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 AC005017.1-201ENST00000482002 490 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN1P18031 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN1P18031 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN1P18031 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.81□□□□□ -1.32
PTPN1P18031 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.81□□□□□ -1.32
PTPN1P18031 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN1P18031 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.81□□□□□ -1.32
PTPN1P18031 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN1P18031 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN1P18031 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN1P18031 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.81□□□□□ -1.32
PTPN1P18031 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN1P18031 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.81□□□□□ -1.32
PTPN1P18031 OSBPL9P5-201ENST00000542581 171 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN1P18031 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN1P18031 AC027667.1-201ENST00000545814 304 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 AC125611.1-201ENST00000549563 229 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.81□□□□□ -1.32
PTPN1P18031 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.81□□□□□ -1.32
PTPN1P18031 MTCO3P22-201ENST00000603219 784 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 AC005034.4-201ENST00000603612 899 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 AC012557.2-201ENST00000605919 418 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN1P18031 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.81□□□□□ -1.32
PTPN1P18031 AC079416.3-201ENST00000624479 549 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN1P18031 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN1P18031 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN1P18031 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN1P18031 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN1P18031 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN1P18031 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PTPN1P18031 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN1P18031 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
PTPN1P18031 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN1P18031 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.81□□□□□ -1.32
PTPN1P18031 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
PTPN1P18031 TNPO1P2-201ENST00000426249 2665 ntBASIC6.81□□□□□ -1.32
PTPN1P18031 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.81□□□□□ -1.32
PTPN1P18031 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.8□□□□□ -1.32
PTPN1P18031 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
PTPN1P18031 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 AL355578.1-201ENST00000607405 1328 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
PTPN1P18031 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
PTPN1P18031 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
PTPN1P18031 AP002370.1-201ENST00000528055 1602 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 RNA5SP198-201ENST00000410376 127 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 RN7SKP86-201ENST00000410454 332 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 RPL22P18-201ENST00000417197 377 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 MTCO3P4-201ENST00000419236 787 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.8□□□□□ -1.32
PTPN1P18031 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.8□□□□□ -1.32
PTPN1P18031 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN1P18031 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN1P18031 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN1P18031 ARF4P4-201ENST00000439608 520 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 BUD31P2-201ENST00000449374 300 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 AC092155.2-201ENST00000454675 477 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 VN1R40P-201ENST00000455196 941 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PTPN1P18031 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.8□□□□□ -1.32
PTPN1P18031 CBX1P5-201ENST00000475330 559 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 AC004263.1-201ENST00000479327 332 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 RN7SL741P-201ENST00000482473 289 ntBASIC6.8□□□□□ -1.32
PTPN1P18031 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN1P18031 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.8□□□□□ -1.32
PTPN1P18031 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms