Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RPS3AP38-201ENST00000435889 763 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGA1P17096 AC007386.1-201ENST00000455212 582 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 RPS23P2-201ENST00000463671 415 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 EIF1P7-201ENST00000487533 337 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGA1P17096 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGA1P17096 IGLV3-24-201ENST00000517477 197 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.93□□□□□ -1.46
HMGA1P17096 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 IMMP1LP3-201ENST00000604197 224 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 PPATP2-201ENST00000605635 508 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.93□□□□□ -1.46
HMGA1P17096 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.93□□□□□ -1.46
HMGA1P17096 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 AC235565.1-201ENST00000456962 1325 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGA1P17096 ZNF840P-201ENST00000504759 1996 ntBASIC5.93□□□□□ -1.46
HMGA1P17096 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HMGA1P17096 AC010329.1-201ENST00000593903 8328 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HMGA1P17096 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
HMGA1P17096 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGA1P17096 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
HMGA1P17096 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
HMGA1P17096 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HMGA1P17096 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGA1P17096 OR9K1P-201ENST00000326513 941 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 SNORA11B-201ENST00000408175 129 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 RN7SKP59-201ENST00000410520 314 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 AL355433.1-201ENST00000422804 300 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGA1P17096 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGA1P17096 VDAC2P4-201ENST00000452925 711 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HMGA1P17096 AC100832.1-201ENST00000471945 383 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 COPS8P2-201ENST00000473228 627 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 AC079080.1-201ENST00000479841 822 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 AC008638.1-201ENST00000506035 866 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 BX510359.5-201ENST00000515651 304 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 AC027308.1-201ENST00000517993 110 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGA1P17096 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGA1P17096 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGA1P17096 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGA1P17096 FKBP1AP1-201ENST00000594588 318 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 SUMO2P15-201ENST00000604285 278 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 MIR8080-201ENST00000622224 89 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 AC132068.1-201ENST00000623805 459 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HMGA1P17096 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGA1P17096 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGA1P17096 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HMGA1P17096 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGA1P17096 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGA1P17096 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGA1P17096 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGA1P17096 AC061975.7-201ENST00000592016 2692 ntBASIC5.92□□□□□ -1.46
HMGA1P17096 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGA1P17096 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGA1P17096 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGA1P17096 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGA1P17096 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGA1P17096 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
HMGA1P17096 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGA1P17096 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGA1P17096 RNA5SP91-201ENST00000390902 119 ntBASIC5.91□□□□□ -1.46
HMGA1P17096 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGA1P17096 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGA1P17096 LYPLA1P1-201ENST00000434514 622 ntBASIC5.91□□□□□ -1.46
HMGA1P17096 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGA1P17096 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGA1P17096 AL163193.1-201ENST00000444895 788 ntBASIC5.91□□□□□ -1.46
HMGA1P17096 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGA1P17096 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGA1P17096 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.91□□□□□ -1.46
HMGA1P17096 AGGF1P7-201ENST00000562369 913 ntBASIC5.91□□□□□ -1.46
HMGA1P17096 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGA1P17096 AL163952.1-202ENST00000569625 600 ntBASIC5.91□□□□□ -1.46
HMGA1P17096 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGA1P17096 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.91□□□□□ -1.46
HMGA1P17096 SUGT1P3-202ENST00000604259 383 ntBASIC5.91□□□□□ -1.46
HMGA1P17096 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms