Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL11A1P12107 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.42□□□□□ -1.38
COL11A1P12107 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL11A1P12107 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
COL11A1P12107 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
COL11A1P12107 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
COL11A1P12107 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COL11A1P12107 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL11A1P12107 RNA5SP507-201ENST00000363603 121 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 ZNF101P1-201ENST00000435701 1720 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 RN7SL329P-201ENST00000467740 299 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.41□□□□□ -1.38
COL11A1P12107 RPS17P5-201ENST00000498293 408 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 PGAM1P13-201ENST00000507497 754 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.41□□□□□ -1.38
COL11A1P12107 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.41□□□□□ -1.38
COL11A1P12107 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.41□□□□□ -1.38
COL11A1P12107 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.41□□□□□ -1.38
COL11A1P12107 AL683813.2-201ENST00000605245 502 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
COL11A1P12107 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL11A1P12107 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.41□□□□□ -1.38
COL11A1P12107 WBP11P1-201ENST00000562560 1931 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL11A1P12107 ZNF658B-201ENST00000602828 3408 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.41□□□□□ -1.38
COL11A1P12107 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.41□□□□□ -1.38
COL11A1P12107 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.41□□□□□ -1.38
COL11A1P12107 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.41□□□□□ -1.38
COL11A1P12107 U8.4-201ENST00000363626 134 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.41□□□□□ -1.38
COL11A1P12107 RN7SKP216-201ENST00000411050 312 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 AL390774.1-201ENST00000411924 246 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 MEMO1P4-201ENST00000453590 386 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 RPSAP50-201ENST00000481955 852 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
COL11A1P12107 FTH1P8-201ENST00000498161 514 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 TOMM22P4-201ENST00000511318 336 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.41□□□□□ -1.38
COL11A1P12107 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.41□□□□□ -1.38
COL11A1P12107 AL353729.2-201ENST00000605859 1249 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.41□□□□□ -1.38
COL11A1P12107 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL11A1P12107 AL034549.2-201ENST00000618285 3373 ntBASIC6.41□□□□□ -1.38
COL11A1P12107 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL11A1P12107 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
COL11A1P12107 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL11A1P12107 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL11A1P12107 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL11A1P12107 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL11A1P12107 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
COL11A1P12107 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
COL11A1P12107 PWAR1-201ENST00000624188 2414 ntBASIC6.4□□□□□ -1.38
COL11A1P12107 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
COL11A1P12107 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
COL11A1P12107 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL11A1P12107 AC006206.1-201ENST00000544842 3387 ntBASIC6.4□□□□□ -1.38
COL11A1P12107 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL11A1P12107 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
COL11A1P12107 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COL11A1P12107 RPS17P17-201ENST00000419392 409 ntBASIC6.4□□□□□ -1.38
COL11A1P12107 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.4□□□□□ -1.38
COL11A1P12107 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.4□□□□□ -1.38
COL11A1P12107 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.4□□□□□ -1.38
COL11A1P12107 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.4□□□□□ -1.38
COL11A1P12107 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.4□□□□□ -1.38
COL11A1P12107 NDUFB5P1-201ENST00000508134 564 ntBASIC6.4□□□□□ -1.38
COL11A1P12107 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
COL11A1P12107 HMGN2P6-201ENST00000551091 273 ntBASIC6.4□□□□□ -1.38
COL11A1P12107 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.4□□□□□ -1.38
COL11A1P12107 DHFRP1-201ENST00000579682 559 ntBASIC6.4□□□□□ -1.38
COL11A1P12107 AP005403.1-201ENST00000579720 229 ntBASIC6.4□□□□□ -1.38
COL11A1P12107 AP002884.5-201ENST00000595053 1132 ntBASIC6.4□□□□□ -1.38
COL11A1P12107 AC008115.3-201ENST00000614874 549 ntBASIC6.4□□□□□ -1.38
COL11A1P12107 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL11A1P12107 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
COL11A1P12107 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL11A1P12107 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
COL11A1P12107 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.4□□□□□ -1.39
COL11A1P12107 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
COL11A1P12107 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL11A1P12107 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.39□□□□□ -1.39
COL11A1P12107 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.39□□□□□ -1.39
COL11A1P12107 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
COL11A1P12107 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL11A1P12107 SNORD1C-201ENST00000363315 78 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL11A1P12107 SNORA70-201ENST00000384436 135 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 AC006455.6-201ENST00000426192 893 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.39□□□□□ -1.39
COL11A1P12107 AC004815.1-201ENST00000484185 331 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 AC231760.1-201ENST00000498002 260 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 AC074255.1-201ENST00000511259 501 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 RNU6-941P-201ENST00000516346 108 ntBASIC6.39□□□□□ -1.39
COL11A1P12107 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.39□□□□□ -1.39
COL11A1P12107 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms